Insufficient scRNA-seq data for expression of DEPDC1 at single-cell level.
Insufficient scRNA-seq data for expression of DEPDC1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
skin | 91% | 831.34 | 1640 / 1809 | 78% | 7.03 | 370 / 472 |
intestine | 52% | 138.69 | 499 / 966 | 93% | 8.13 | 492 / 527 |
esophagus | 42% | 204.78 | 601 / 1445 | 99% | 16.20 | 182 / 183 |
stomach | 43% | 88.77 | 154 / 359 | 93% | 8.85 | 266 / 286 |
lung | 39% | 48.11 | 228 / 578 | 85% | 8.15 | 977 / 1155 |
bladder | 29% | 16.76 | 6 / 21 | 88% | 8.87 | 444 / 504 |
uterus | 8% | 8.88 | 14 / 170 | 97% | 13.90 | 443 / 459 |
ovary | 7% | 13.22 | 12 / 180 | 95% | 10.24 | 409 / 430 |
breast | 18% | 13.92 | 84 / 459 | 83% | 7.66 | 932 / 1118 |
tonsil | 0% | 0 | 0 / 0 | 100% | 14.67 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.35 | 1 / 1 |
lymph node | 0% | 0 | 0 / 0 | 90% | 6.88 | 26 / 29 |
prostate | 48% | 86.88 | 117 / 245 | 32% | 2.15 | 161 / 502 |
spleen | 79% | 129.40 | 190 / 241 | 0% | 0 | 0 / 0 |
liver | 15% | 24.42 | 33 / 226 | 41% | 2.30 | 167 / 406 |
pancreas | 4% | 3.34 | 12 / 328 | 47% | 2.52 | 83 / 178 |
adrenal gland | 34% | 29.77 | 87 / 258 | 12% | 0.84 | 27 / 230 |
peripheral blood | 42% | 414.76 | 394 / 929 | 0% | 0 | 0 / 0 |
brain | 6% | 3.19 | 170 / 2642 | 32% | 2.13 | 227 / 705 |
thymus | 12% | 8.38 | 76 / 653 | 13% | 1.11 | 77 / 605 |
kidney | 10% | 16.90 | 9 / 89 | 12% | 0.60 | 109 / 901 |
adipose | 18% | 14.96 | 211 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 9% | 5.81 | 116 / 1335 | 0% | 0 | 0 / 0 |
heart | 8% | 6.51 | 70 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 3% | 0.09 | 2 / 80 |
muscle | 1% | 0.37 | 5 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0035556 | Biological process | intracellular signal transduction |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0017053 | Cellular component | transcription repressor complex |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0005096 | Molecular function | GTPase activator activity |
Gene name | DEPDC1 |
Protein name | DEP domain containing 1 DEP domain-containing protein 1A |
Synonyms | DEPDC1A |
Description | FUNCTION: May be involved in transcriptional regulation as a transcriptional corepressor. The DEPDC1A-ZNF224 complex may play a critical role in bladder carcinogenesis by repressing the transcription of the A20 gene, leading to transport of NF-KB protein into the nucleus, resulting in suppression of apoptosis of bladder cancer cells. . |
Accessions | ENST00000456315.7 [Q5TB30-5] ENST00000525124.1 ENST00000370966.9 [Q5TB30-2] E9PL61 ENST00000489862.1 Q5TB30 H0YES2 |