I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| endothelial cell | 8 studies | 25% ± 11% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| endothelial cell | 8 studies | 25% ± 11% |
Insufficient scRNA-seq data for expression of DCHS1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| breast | 100% | 4509.70 | 459 / 459 | 88% | 12.00 | 989 / 1118 |
| stomach | 98% | 3294.28 | 351 / 359 | 88% | 11.63 | 253 / 286 |
| brain | 85% | 1406.83 | 2237 / 2642 | 96% | 18.59 | 674 / 705 |
| intestine | 100% | 6114.11 | 962 / 966 | 80% | 7.59 | 422 / 527 |
| prostate | 99% | 4267.53 | 242 / 245 | 78% | 8.19 | 394 / 502 |
| esophagus | 91% | 3845.19 | 1318 / 1445 | 84% | 9.60 | 154 / 183 |
| lung | 100% | 4591.34 | 577 / 578 | 75% | 7.01 | 862 / 1155 |
| thymus | 99% | 2001.70 | 646 / 653 | 70% | 4.76 | 422 / 605 |
| ovary | 100% | 5234.39 | 180 / 180 | 61% | 6.47 | 262 / 430 |
| kidney | 97% | 1691.15 | 86 / 89 | 64% | 9.76 | 575 / 901 |
| skin | 81% | 1307.21 | 1469 / 1809 | 74% | 10.51 | 349 / 472 |
| bladder | 100% | 6599.62 | 21 / 21 | 51% | 4.60 | 259 / 504 |
| uterus | 99% | 11963.62 | 169 / 170 | 48% | 8.54 | 222 / 459 |
| pancreas | 66% | 650.83 | 215 / 328 | 82% | 8.67 | 146 / 178 |
| adrenal gland | 86% | 1054.08 | 221 / 258 | 56% | 5.14 | 129 / 230 |
| adipose | 100% | 4230.78 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| spleen | 100% | 5669.55 | 241 / 241 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 4691.77 | 1332 / 1335 | 0% | 0 | 0 / 0 |
| heart | 98% | 2439.44 | 844 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 61% | 3.91 | 49 / 80 |
| tonsil | 0% | 0 | 0 / 0 | 47% | 3.88 | 21 / 45 |
| liver | 18% | 182.09 | 40 / 226 | 18% | 0.88 | 73 / 406 |
| muscle | 28% | 283.90 | 228 / 803 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 17% | 0.77 | 5 / 29 |
| peripheral blood | 1% | 10.94 | 11 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0098742 | Biological process | cell-cell adhesion via plasma-membrane adhesion molecules |
| GO_0001658 | Biological process | branching involved in ureteric bud morphogenesis |
| GO_0072659 | Biological process | protein localization to plasma membrane |
| GO_0035329 | Biological process | hippo signaling |
| GO_0003192 | Biological process | mitral valve formation |
| GO_0007275 | Biological process | multicellular organism development |
| GO_0072137 | Biological process | condensed mesenchymal cell proliferation |
| GO_0003273 | Biological process | cell migration involved in endocardial cushion formation |
| GO_0022008 | Biological process | neurogenesis |
| GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
| GO_0036342 | Biological process | post-anal tail morphogenesis |
| GO_0090102 | Biological process | cochlea development |
| GO_0016339 | Biological process | calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules |
| GO_0048565 | Biological process | digestive tract development |
| GO_0021915 | Biological process | neural tube development |
| GO_0043931 | Biological process | ossification involved in bone maturation |
| GO_0007157 | Biological process | heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules |
| GO_0016477 | Biological process | cell migration |
| GO_0007389 | Biological process | pattern specification process |
| GO_0016020 | Cellular component | membrane |
| GO_0016342 | Cellular component | catenin complex |
| GO_0045177 | Cellular component | apical part of cell |
| GO_0045296 | Molecular function | cadherin binding |
| GO_0008013 | Molecular function | beta-catenin binding |
| GO_0005509 | Molecular function | calcium ion binding |
| Gene name | DCHS1 |
| Protein name | Protocadherin-16 (Cadherin-19) (Cadherin-25) (Fibroblast cadherin-1) (Protein dachsous homolog 1) |
| Synonyms | PCDH16 KIAA1773 FIB1 CDH25 CDH19 |
| Description | FUNCTION: Calcium-dependent cell-adhesion protein. Mediates functions in neuroprogenitor cell proliferation and differentiation. In the heart, has a critical role for proper morphogenesis of the mitral valve, acting in the regulation of cell migration involved in valve formation . . |
| Accessions | Q96JQ0 ENST00000299441.5 |
