Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 8 studies | 29% ± 18% | |
kidney distal convoluted tubule epithelial cell | 6 studies | 45% ± 10% | |
kidney loop of Henle epithelial cell | 4 studies | 28% ± 10% | |
renal principal cell | 4 studies | 53% ± 16% | |
cholangiocyte | 3 studies | 68% ± 13% | |
epithelial cell | 3 studies | 44% ± 23% | |
glutamatergic neuron | 3 studies | 31% ± 4% | |
pancreatic ductal cell | 3 studies | 54% ± 22% | |
type I pneumocyte | 3 studies | 25% ± 6% | |
parietal epithelial cell | 3 studies | 63% ± 12% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
kidney | 3 studies | 33% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 100% | 3803.52 | 89 / 89 | 87% | 34.57 | 785 / 901 |
thymus | 100% | 685.19 | 652 / 653 | 85% | 19.73 | 512 / 605 |
pancreas | 100% | 1631.39 | 328 / 328 | 75% | 9.19 | 133 / 178 |
liver | 91% | 172.30 | 206 / 226 | 66% | 39.67 | 269 / 406 |
lung | 94% | 264.61 | 541 / 578 | 25% | 2.22 | 285 / 1155 |
ovary | 26% | 41.41 | 46 / 180 | 92% | 18.38 | 395 / 430 |
breast | 57% | 191.64 | 260 / 459 | 47% | 6.02 | 529 / 1118 |
prostate | 63% | 119.71 | 154 / 245 | 36% | 2.56 | 179 / 502 |
stomach | 68% | 119.72 | 243 / 359 | 31% | 2.36 | 88 / 286 |
adrenal gland | 81% | 145.76 | 209 / 258 | 4% | 0.31 | 9 / 230 |
brain | 62% | 109.36 | 1648 / 2642 | 8% | 0.65 | 56 / 705 |
bladder | 38% | 73.71 | 8 / 21 | 19% | 1.85 | 98 / 504 |
intestine | 19% | 21.28 | 186 / 966 | 37% | 3.51 | 197 / 527 |
uterus | 20% | 66.80 | 34 / 170 | 24% | 4.75 | 108 / 459 |
esophagus | 1% | 0.88 | 14 / 1445 | 27% | 3.84 | 49 / 183 |
muscle | 24% | 22.65 | 189 / 803 | 0% | 0 | 0 / 0 |
skin | 3% | 2.05 | 54 / 1809 | 20% | 1.19 | 96 / 472 |
eye | 0% | 0 | 0 / 0 | 16% | 0.79 | 13 / 80 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.97 | 1 / 45 |
peripheral blood | 1% | 1.16 | 11 / 929 | 0% | 0 | 0 / 0 |
blood vessel | 1% | 0.99 | 14 / 1335 | 0% | 0 | 0 / 0 |
adipose | 1% | 0.98 | 11 / 1204 | 0% | 0 | 0 / 0 |
heart | 0% | 0.25 | 2 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0060271 | Biological process | cilium assembly |
GO_0007605 | Biological process | sensory perception of sound |
GO_0048813 | Biological process | dendrite morphogenesis |
GO_0001764 | Biological process | neuron migration |
GO_0006968 | Biological process | cellular defense response |
GO_1902017 | Biological process | regulation of cilium assembly |
GO_0045880 | Biological process | positive regulation of smoothened signaling pathway |
GO_0035556 | Biological process | intracellular signal transduction |
GO_0030111 | Biological process | regulation of Wnt signaling pathway |
GO_0060091 | Cellular component | kinocilium |
GO_0034451 | Cellular component | centriolar satellite |
GO_0005874 | Cellular component | microtubule |
GO_0072686 | Cellular component | mitotic spindle |
GO_0005815 | Cellular component | microtubule organizing center |
GO_0005930 | Cellular component | axoneme |
GO_0005929 | Cellular component | cilium |
GO_0005829 | Cellular component | cytosol |
GO_0015630 | Cellular component | microtubule cytoskeleton |
GO_0005737 | Cellular component | cytoplasm |
GO_0005515 | Molecular function | protein binding |
GO_0019894 | Molecular function | kinesin binding |
Gene name | DCDC2 |
Protein name | Doublecortin domain containing 2 Doublecortin domain-containing protein 2 (Protein RU2S) |
Synonyms | KIAA1154 RU2 |
Description | FUNCTION: Protein that plays a role in the inhibition of canonical Wnt signaling pathway . May be involved in neuronal migration during development of the cerebral neocortex (By similarity). Involved in the control of ciliogenesis and ciliary length . . |
Accessions | ENST00000378454.8 [Q9UHG0-1] ENST00000378450.6 [Q9UHG0-2] Q9UHG0 ENST00000436313.1 H0Y784 |