Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 9 studies | 24% ± 9% | |
retinal rod cell | 6 studies | 22% ± 5% | |
oligodendrocyte | 6 studies | 31% ± 9% | |
oligodendrocyte precursor cell | 6 studies | 30% ± 11% | |
epithelial cell | 5 studies | 26% ± 10% | |
retinal cone cell | 5 studies | 26% ± 8% | |
astrocyte | 5 studies | 36% ± 13% | |
microglial cell | 4 studies | 23% ± 4% | |
abnormal cell | 4 studies | 21% ± 3% | |
smooth muscle cell | 3 studies | 18% ± 1% | |
retinal bipolar neuron | 3 studies | 17% ± 1% | |
fibroblast | 3 studies | 20% ± 1% | |
glutamatergic neuron | 3 studies | 55% ± 27% | |
interneuron | 3 studies | 47% ± 21% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 10057.71 | 21 / 21 | 100% | 16.91 | 504 / 504 |
esophagus | 100% | 10112.14 | 1445 / 1445 | 100% | 15.01 | 183 / 183 |
liver | 100% | 9431.78 | 226 / 226 | 100% | 21.31 | 406 / 406 |
ovary | 100% | 10097.08 | 180 / 180 | 100% | 22.02 | 430 / 430 |
pancreas | 100% | 6973.39 | 328 / 328 | 100% | 18.00 | 178 / 178 |
prostate | 100% | 9910.57 | 245 / 245 | 100% | 19.72 | 502 / 502 |
thymus | 100% | 13787.02 | 653 / 653 | 100% | 26.88 | 605 / 605 |
lung | 100% | 8709.22 | 578 / 578 | 100% | 16.99 | 1153 / 1155 |
breast | 100% | 10349.95 | 459 / 459 | 100% | 25.36 | 1116 / 1118 |
uterus | 100% | 10195.45 | 170 / 170 | 100% | 17.36 | 458 / 459 |
kidney | 100% | 8282.45 | 89 / 89 | 100% | 18.83 | 899 / 901 |
brain | 100% | 7917.34 | 2633 / 2642 | 100% | 27.16 | 705 / 705 |
stomach | 100% | 8614.87 | 359 / 359 | 100% | 12.68 | 285 / 286 |
intestine | 100% | 10586.06 | 966 / 966 | 100% | 13.60 | 525 / 527 |
skin | 100% | 9430.96 | 1809 / 1809 | 100% | 17.39 | 470 / 472 |
adrenal gland | 100% | 9545.04 | 258 / 258 | 98% | 16.51 | 225 / 230 |
adipose | 100% | 9427.98 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 10168.23 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 17.94 | 29 / 29 |
muscle | 100% | 17258.06 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 11120.24 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 11.28 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.24 | 1 / 1 |
eye | 0% | 0 | 0 / 0 | 99% | 15.55 | 79 / 80 |
heart | 98% | 8079.67 | 848 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 5250.73 | 901 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016567 | Biological process | protein ubiquitination |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0080008 | Cellular component | Cul4-RING E3 ubiquitin ligase complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0005739 | Cellular component | mitochondrion |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | DCAF8 |
Protein name | DDB1- and CUL4-associated factor 8 (WD repeat-containing protein 42A) DDB1 and CUL4 associated factor 8 |
Synonyms | H326 WDR42A |
Description | FUNCTION: May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex. . |
Accessions | V9GY98 V9GZ39 ENST00000447377.5 Q5TAQ6 ENST00000473382.2 Q5TAQ8 V9GY54 ENST00000475733.5 [Q5TAQ9-2] V9GYZ9 V9GYQ9 ENST00000461888.5 ENST00000477163.1 ENST00000419626.1 ENST00000490368.5 ENST00000440682.5 Q5TAQ7 ENST00000610139.5 [Q5TAQ9-2] ENST00000407642.6 Q5TAQ5 ENST00000368074.6 [Q5TAQ9-1] ENST00000326837.6 [Q5TAQ9-1] Q5TAQ9 ENST00000495887.1 ENST00000368073.7 [Q5TAQ9-1] |