Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 16 studies | 24% ± 10% | |
smooth muscle cell | 14 studies | 22% ± 5% | |
pericyte | 13 studies | 21% ± 5% | |
endothelial cell | 10 studies | 26% ± 11% | |
myofibroblast cell | 8 studies | 21% ± 3% | |
connective tissue cell | 7 studies | 24% ± 7% | |
endothelial cell of lymphatic vessel | 6 studies | 21% ± 7% | |
epithelial cell | 5 studies | 35% ± 14% | |
ciliated cell | 5 studies | 26% ± 6% | |
endothelial cell of vascular tree | 4 studies | 19% ± 2% | |
hematopoietic precursor cell | 3 studies | 23% ± 6% | |
macrophage | 3 studies | 23% ± 5% | |
dendritic cell | 3 studies | 32% ± 7% | |
basal cell | 3 studies | 28% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2452.21 | 1445 / 1445 | 100% | 13.47 | 183 / 183 |
kidney | 100% | 1776.22 | 89 / 89 | 100% | 24.96 | 901 / 901 |
liver | 100% | 1080.14 | 226 / 226 | 100% | 17.41 | 406 / 406 |
lung | 100% | 1929.46 | 578 / 578 | 100% | 18.82 | 1155 / 1155 |
ovary | 100% | 2825.21 | 180 / 180 | 100% | 25.52 | 430 / 430 |
prostate | 100% | 2481.16 | 245 / 245 | 100% | 26.67 | 502 / 502 |
stomach | 100% | 1811.75 | 359 / 359 | 100% | 17.33 | 286 / 286 |
thymus | 100% | 2269.83 | 653 / 653 | 100% | 32.47 | 605 / 605 |
uterus | 100% | 3337.74 | 170 / 170 | 100% | 26.11 | 459 / 459 |
brain | 100% | 1906.07 | 2640 / 2642 | 100% | 38.87 | 705 / 705 |
breast | 100% | 2720.52 | 459 / 459 | 100% | 23.20 | 1117 / 1118 |
skin | 100% | 1677.08 | 1807 / 1809 | 100% | 24.58 | 472 / 472 |
intestine | 100% | 2752.93 | 966 / 966 | 100% | 18.14 | 526 / 527 |
bladder | 100% | 3087.90 | 21 / 21 | 100% | 22.39 | 503 / 504 |
adrenal gland | 100% | 1807.90 | 258 / 258 | 100% | 19.96 | 229 / 230 |
pancreas | 97% | 780.77 | 317 / 328 | 100% | 24.13 | 178 / 178 |
adipose | 100% | 2857.97 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3289.30 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 26.85 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 27.28 | 29 / 29 |
muscle | 100% | 2174.24 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1954.10 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 17.08 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 15.97 | 1 / 1 |
heart | 99% | 1589.73 | 855 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 85% | 827.22 | 786 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008150 | Biological process | biological_process |
GO_0008270 | Molecular function | zinc ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | CZIB |
Protein name | CXXC motif containing zinc binding protein (UPF0587 protein C1orf123) |
Synonyms | C1orf123 |
Description | |
Accessions | Q9NWV4 ENST00000294360.5 |