Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 21 studies | 26% ± 9% | |
pericyte | 13 studies | 39% ± 14% | |
connective tissue cell | 6 studies | 35% ± 10% | |
retinal ganglion cell | 4 studies | 46% ± 25% | |
GABAergic neuron | 3 studies | 23% ± 5% |
Insufficient scRNA-seq data for expression of CYGB at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
stomach | 97% | 1462.72 | 349 / 359 | 95% | 25.53 | 272 / 286 |
lung | 99% | 2152.32 | 575 / 578 | 92% | 15.95 | 1066 / 1155 |
intestine | 100% | 2118.56 | 963 / 966 | 92% | 20.14 | 483 / 527 |
thymus | 100% | 4321.21 | 651 / 653 | 91% | 20.08 | 549 / 605 |
breast | 100% | 4499.04 | 459 / 459 | 87% | 13.89 | 975 / 1118 |
skin | 92% | 1314.41 | 1662 / 1809 | 94% | 84.64 | 446 / 472 |
bladder | 100% | 4020.00 | 21 / 21 | 86% | 15.64 | 431 / 504 |
prostate | 99% | 2412.94 | 242 / 245 | 85% | 10.94 | 425 / 502 |
esophagus | 87% | 1559.18 | 1262 / 1445 | 93% | 17.65 | 170 / 183 |
uterus | 98% | 1703.68 | 167 / 170 | 58% | 10.36 | 265 / 459 |
adrenal gland | 64% | 717.64 | 164 / 258 | 90% | 162.11 | 208 / 230 |
kidney | 64% | 787.29 | 57 / 89 | 83% | 28.74 | 749 / 901 |
pancreas | 48% | 394.14 | 156 / 328 | 99% | 34.92 | 176 / 178 |
ovary | 76% | 1012.47 | 137 / 180 | 48% | 5.38 | 205 / 430 |
liver | 38% | 352.56 | 86 / 226 | 76% | 11.51 | 309 / 406 |
brain | 72% | 924.75 | 1914 / 2642 | 33% | 4.36 | 236 / 705 |
adipose | 100% | 5947.56 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 236.65 | 80 / 80 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.88 | 1 / 1 |
heart | 100% | 4296.37 | 860 / 861 | 0% | 0 | 0 / 0 |
muscle | 84% | 770.01 | 673 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 76% | 8.04 | 22 / 29 |
spleen | 75% | 845.61 | 181 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 67% | 9.10 | 30 / 45 |
blood vessel | 66% | 1084.38 | 885 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 1.91 | 3 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0046210 | Biological process | nitric oxide catabolic process |
GO_0019395 | Biological process | fatty acid oxidation |
GO_0032966 | Biological process | negative regulation of collagen biosynthetic process |
GO_0010764 | Biological process | negative regulation of fibroblast migration |
GO_2000490 | Biological process | negative regulation of hepatic stellate cell activation |
GO_0001666 | Biological process | response to hypoxia |
GO_0015671 | Biological process | oxygen transport |
GO_0019430 | Biological process | removal of superoxide radicals |
GO_0006979 | Biological process | response to oxidative stress |
GO_0043025 | Cellular component | neuronal cell body |
GO_0043005 | Cellular component | neuron projection |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0004601 | Molecular function | peroxidase activity |
GO_0004096 | Molecular function | catalase activity |
GO_0141118 | Molecular function | nitric oxide dioxygenase activity, heme protein as donor |
GO_0070025 | Molecular function | carbon monoxide binding |
GO_0004784 | Molecular function | superoxide dismutase activity |
GO_0019825 | Molecular function | oxygen binding |
GO_0016491 | Molecular function | oxidoreductase activity |
GO_0005506 | Molecular function | iron ion binding |
GO_0020037 | Molecular function | heme binding |
GO_0005344 | Molecular function | oxygen carrier activity |
GO_0047888 | Molecular function | fatty acid peroxidase activity |
GO_0098809 | Molecular function | nitrite reductase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | CYGB |
Protein name | Cytoglobin Cytoglobin (Histoglobin) (HGb) (Nitric oxygen dioxygenase CYGB) (NOD) (EC 1.14.12.-) (Nitrite reductase CYGB) (EC 1.7.-.-) (Pseudoperoxidase CYGB) (EC 1.11.1.-) (Stellate cell activation-associated protein) (Superoxide dismutase CYGB) (EC 1.15.1.1) |
Synonyms | STAP |
Description | FUNCTION: Probable multifunctional globin with a hexacoordinated heme iron required for the catalysis of various reactions depending on redox condition of the cell as well as oxygen availability . Has a nitric oxide dioxygenase (NOD) activity and is most probably involved in cell-mediated and oxygen-dependent nitric oxide consumption . By scavenging this second messenger may regulate several biological processes including endothelium-mediated vasodilation and vascular tone . Under normoxic conditions functions as a nitric oxide dioxygenase (NOD) but under hypoxic conditions the globin may switch its function to that of a nitrite (NO2) reductase (NiR), generating nitric oxide . Could also have peroxidase and superoxide dismutase activities, detoxifying reactive oxygen species and protecting cells against oxidative stress . Also binds dioxygen with low affinity and could function as an oxygen sensor but has probably no function as a respiratory oxygen carrier . . |
Accessions | K7EIM9 ENST00000590175.5 Q8WWM9 ENST00000589145.1 K7EMC7 ENST00000589342.1 ENST00000293230.10 |