Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 15 studies | 88% ± 16% | |
glutamatergic neuron | 13 studies | 82% ± 20% | |
astrocyte | 12 studies | 47% ± 21% | |
GABAergic neuron | 11 studies | 73% ± 21% | |
oligodendrocyte | 11 studies | 42% ± 22% | |
endothelial cell | 9 studies | 46% ± 21% | |
microglial cell | 9 studies | 46% ± 20% | |
interneuron | 6 studies | 78% ± 16% | |
neuron | 5 studies | 49% ± 20% | |
granule cell | 4 studies | 56% ± 25% | |
macrophage | 3 studies | 30% ± 8% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 82% ± 6% | |
GABAergic interneuron | 3 studies | 83% ± 12% | |
GABAergic amacrine cell | 3 studies | 36% ± 8% | |
glycinergic amacrine cell | 3 studies | 45% ± 15% | |
ciliated cell | 3 studies | 24% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 18 studies | 54% ± 26% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1467.93 | 2634 / 2642 | 83% | 4.57 | 587 / 705 |
kidney | 44% | 89.16 | 39 / 89 | 8% | 0.23 | 75 / 901 |
uterus | 36% | 150.84 | 61 / 170 | 5% | 0.11 | 25 / 459 |
lung | 26% | 62.73 | 151 / 578 | 13% | 0.35 | 146 / 1155 |
skin | 8% | 15.27 | 138 / 1809 | 28% | 1.29 | 131 / 472 |
spleen | 33% | 156.38 | 79 / 241 | 0% | 0 | 0 / 0 |
thymus | 12% | 24.05 | 77 / 653 | 20% | 0.91 | 121 / 605 |
tonsil | 0% | 0 | 0 / 0 | 24% | 0.98 | 11 / 45 |
ovary | 19% | 48.18 | 35 / 180 | 5% | 0.08 | 20 / 430 |
breast | 15% | 34.73 | 71 / 459 | 6% | 0.17 | 70 / 1118 |
prostate | 16% | 39.61 | 39 / 245 | 2% | 0.07 | 10 / 502 |
adipose | 16% | 40.76 | 198 / 1204 | 0% | 0 | 0 / 0 |
muscle | 16% | 45.92 | 129 / 803 | 0% | 0 | 0 / 0 |
esophagus | 4% | 7.29 | 52 / 1445 | 11% | 0.36 | 20 / 183 |
adrenal gland | 13% | 31.70 | 34 / 258 | 1% | 0.04 | 3 / 230 |
liver | 0% | 0 | 0 / 226 | 14% | 0.32 | 58 / 406 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.19 | 2 / 29 |
stomach | 0% | 0 | 0 / 359 | 5% | 0.15 | 15 / 286 |
bladder | 0% | 0 | 0 / 21 | 5% | 0.18 | 26 / 504 |
intestine | 1% | 1.14 | 7 / 966 | 1% | 0.04 | 7 / 527 |
heart | 2% | 3.02 | 17 / 861 | 0% | 0 | 0 / 0 |
pancreas | 1% | 1.53 | 2 / 328 | 1% | 0.05 | 2 / 178 |
blood vessel | 1% | 2.67 | 14 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0.17 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007613 | Biological process | memory |
GO_0008584 | Biological process | male gonad development |
GO_0001964 | Biological process | startle response |
GO_0060745 | Biological process | mammary gland branching involved in pregnancy |
GO_0008585 | Biological process | female gonad development |
GO_1990708 | Biological process | conditioned place preference |
GO_0035846 | Biological process | oviduct epithelium development |
GO_0042593 | Biological process | glucose homeostasis |
GO_0016020 | Cellular component | membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | CSMD1 |
Protein name | CUB and sushi domain-containing protein 1 (CUB and sushi multiple domains protein 1) CUB and Sushi multiple domains 1 |
Synonyms | UNQ5952/PRO19863 KIAA1890 |
Description | FUNCTION: Potential suppressor of squamous cell carcinomas. |
Accessions | ENST00000602557.5 Q96PZ7 E5RIG2 F8W9C3 ENST00000635120.2 [Q96PZ7-1] ENST00000602723.5 ENST00000520002.5 ENST00000335551.11 H7BXU2 ENST00000400186.7 |