Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 25 studies | 29% ± 11% | |
oligodendrocyte | 12 studies | 31% ± 10% | |
classical monocyte | 11 studies | 25% ± 8% | |
ciliated cell | 10 studies | 26% ± 6% | |
vein endothelial cell | 10 studies | 23% ± 7% | |
basal cell | 9 studies | 27% ± 7% | |
club cell | 9 studies | 27% ± 10% | |
neutrophil | 9 studies | 31% ± 6% | |
epithelial cell | 8 studies | 29% ± 12% | |
respiratory goblet cell | 8 studies | 34% ± 12% | |
capillary endothelial cell | 8 studies | 20% ± 8% | |
glutamatergic neuron | 8 studies | 39% ± 23% | |
goblet cell | 7 studies | 36% ± 18% | |
GABAergic neuron | 6 studies | 38% ± 19% | |
astrocyte | 6 studies | 28% ± 12% | |
natural killer cell | 5 studies | 16% ± 1% | |
endothelial cell of lymphatic vessel | 5 studies | 20% ± 3% | |
secretory cell | 5 studies | 30% ± 7% | |
duct epithelial cell | 4 studies | 35% ± 24% | |
endothelial cell of vascular tree | 4 studies | 24% ± 7% | |
fibroblast | 4 studies | 22% ± 2% | |
oligodendrocyte precursor cell | 4 studies | 27% ± 7% | |
interneuron | 4 studies | 42% ± 21% | |
monocyte | 3 studies | 23% ± 6% | |
glomerular endothelial cell | 3 studies | 19% ± 1% | |
neuron | 3 studies | 30% ± 11% | |
pericyte | 3 studies | 18% ± 2% | |
macrophage | 3 studies | 23% ± 6% | |
mucus secreting cell | 3 studies | 52% ± 4% | |
serous secreting cell | 3 studies | 30% ± 6% | |
lymphocyte | 3 studies | 19% ± 5% | |
retinal rod cell | 3 studies | 17% ± 1% | |
alveolar macrophage | 3 studies | 19% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 8069.37 | 578 / 578 | 100% | 72.16 | 1150 / 1155 |
prostate | 100% | 4382.28 | 245 / 245 | 99% | 50.25 | 499 / 502 |
esophagus | 100% | 4795.48 | 1445 / 1445 | 98% | 53.82 | 180 / 183 |
stomach | 100% | 4632.93 | 359 / 359 | 98% | 48.51 | 280 / 286 |
breast | 100% | 6405.98 | 459 / 459 | 98% | 57.06 | 1092 / 1118 |
pancreas | 99% | 3061.27 | 324 / 328 | 99% | 49.95 | 176 / 178 |
intestine | 100% | 3905.19 | 965 / 966 | 97% | 39.81 | 512 / 527 |
kidney | 100% | 4015.34 | 89 / 89 | 97% | 45.15 | 872 / 901 |
liver | 100% | 4787.27 | 226 / 226 | 96% | 44.51 | 391 / 406 |
bladder | 100% | 3847.90 | 21 / 21 | 94% | 34.03 | 476 / 504 |
thymus | 100% | 4873.08 | 653 / 653 | 94% | 43.30 | 570 / 605 |
brain | 97% | 2929.84 | 2572 / 2642 | 95% | 22.13 | 671 / 705 |
uterus | 100% | 4351.48 | 170 / 170 | 92% | 32.19 | 423 / 459 |
skin | 100% | 5474.63 | 1801 / 1809 | 90% | 24.84 | 423 / 472 |
ovary | 99% | 2553.04 | 178 / 180 | 79% | 17.66 | 340 / 430 |
adrenal gland | 98% | 2615.26 | 254 / 258 | 77% | 16.37 | 178 / 230 |
spleen | 100% | 2764.73 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 19.50 | 1 / 1 |
blood vessel | 100% | 3871.94 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 6752.88 | 1203 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 9214.36 | 920 / 929 | 0% | 0 | 0 / 0 |
muscle | 95% | 2162.32 | 766 / 803 | 0% | 0 | 0 / 0 |
heart | 93% | 2393.67 | 804 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 29.00 | 42 / 45 |
eye | 0% | 0 | 0 / 0 | 40% | 4.73 | 32 / 80 |
lymph node | 0% | 0 | 0 / 0 | 38% | 5.65 | 11 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006518 | Biological process | peptide metabolic process |
GO_0016485 | Biological process | protein processing |
GO_0005615 | Cellular component | extracellular space |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0004185 | Molecular function | serine-type carboxypeptidase activity |
GO_0008270 | Molecular function | zinc ion binding |
GO_0004181 | Molecular function | metallocarboxypeptidase activity |
Gene name | CPD |
Protein name | Carboxypeptidase D Carboxypeptidase D (EC 3.4.17.22) (Metallocarboxypeptidase D) (gp180) |
Synonyms | |
Description | |
Accessions | O75976 ENST00000543464.6 [O75976-2] ENST00000584050.6 ENST00000584221.2 ENST00000579502.1 J3QRJ9 ENST00000225719.9 [O75976-1] J3QQJ4 K7ELF0 |