Insufficient scRNA-seq data for expression of COL6A5 at single-cell level.
Insufficient scRNA-seq data for expression of COL6A5 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 99% | 1367.67 | 574 / 578 | 38% | 1.16 | 442 / 1155 |
skin | 48% | 207.96 | 872 / 1809 | 6% | 0.14 | 28 / 472 |
stomach | 40% | 100.27 | 145 / 359 | 4% | 0.09 | 12 / 286 |
esophagus | 25% | 56.89 | 360 / 1445 | 13% | 0.29 | 24 / 183 |
bladder | 24% | 184.81 | 5 / 21 | 11% | 0.29 | 55 / 504 |
intestine | 12% | 22.88 | 115 / 966 | 4% | 0.08 | 23 / 527 |
tonsil | 0% | 0 | 0 / 0 | 13% | 0.26 | 6 / 45 |
pancreas | 1% | 0.47 | 2 / 328 | 6% | 0.12 | 10 / 178 |
brain | 5% | 5.90 | 142 / 2642 | 1% | 0.06 | 6 / 705 |
ovary | 2% | 2.36 | 3 / 180 | 4% | 0.07 | 18 / 430 |
kidney | 4% | 10.87 | 4 / 89 | 0% | 0.00 | 1 / 901 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.04 | 1 / 29 |
thymus | 0% | 0.19 | 2 / 653 | 2% | 0.40 | 14 / 605 |
uterus | 1% | 1.40 | 2 / 170 | 1% | 0.05 | 6 / 459 |
prostate | 1% | 0.69 | 3 / 245 | 1% | 0.01 | 4 / 502 |
breast | 0% | 0.17 | 1 / 459 | 2% | 0.04 | 20 / 1118 |
adrenal gland | 0% | 0 | 0 / 258 | 1% | 0.05 | 2 / 230 |
blood vessel | 1% | 0.53 | 8 / 1335 | 0% | 0 | 0 / 0 |
adipose | 1% | 1.02 | 7 / 1204 | 0% | 0 | 0 / 0 |
muscle | 0% | 0.07 | 1 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 0% | 0 | 0 / 406 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007155 | Biological process | cell adhesion |
GO_0005581 | Cellular component | collagen trimer |
GO_0005576 | Cellular component | extracellular region |
GO_0062023 | Cellular component | collagen-containing extracellular matrix |
GO_0030020 | Molecular function | extracellular matrix structural constituent conferring tensile strength |
GO_0005515 | Molecular function | protein binding |
Gene name | COL6A5 |
Protein name | Collagen alpha-5(VI) chain (Collagen alpha-1(XXIX) chain) (von Willebrand factor A domain-containing protein 4) Collagen alpha-5(VI) chain Collagen type VI alpha 5 chain |
Synonyms | VWA4 COL29A1 |
Description | FUNCTION: Collagen VI acts as a cell-binding protein. . FUNCTION: Collagen VI acts as a cell-binding protein. . |
Accessions | H0Y393 ENST00000512836.6 [A8TX70-2] ENST00000512482.1 H0Y9T2 ENST00000312481.11 [A8TX70-1] H0Y935 ENST00000373157.9 A8TX70 ENST00000512836.5 |