COL24A1 report

Query

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
glutamatergic neuron	6 studies	36% ± 22%	Explore
adipocyte	5 studies	21% ± 4%	Explore
Mueller cell	5 studies	33% ± 6%	Explore
fibroblast	4 studies	23% ± 5%	Explore
microglial cell	3 studies	30% ± 19%	Explore
GABAergic neuron	3 studies	32% ± 14%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	4 studies	39% ± 17%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
lung	78%	253.88	453 / 578	49%	1.09	570 / 1155
bladder	90%	1944.90	19 / 21	25%	0.57	126 / 504
esophagus	63%	749.96	917 / 1445	44%	1.18	81 / 183
intestine	86%	1461.26	835 / 966	19%	0.40	102 / 527
uterus	75%	513.59	127 / 170	26%	0.88	121 / 459
ovary	82%	692.90	147 / 180	17%	0.46	75 / 430
skin	60%	184.89	1080 / 1809	29%	1.86	139 / 472
blood vessel	83%	475.97	1114 / 1335	0%	0	0 / 0
prostate	78%	416.93	191 / 245	2%	0.03	9 / 502
breast	29%	51.01	132 / 459	48%	0.97	537 / 1118
brain	65%	536.91	1725 / 2642	9%	0.31	63 / 705
kidney	62%	200.09	55 / 89	7%	0.16	67 / 901
thymus	65%	153.98	427 / 653	3%	0.05	17 / 605
heart	68%	318.16	584 / 861	0%	0	0 / 0
stomach	46%	532.79	164 / 359	20%	0.60	57 / 286
adipose	52%	162.67	631 / 1204	0%	0	0 / 0
spleen	44%	98.07	106 / 241	0%	0	0 / 0
pancreas	1%	1.51	4 / 328	37%	0.79	65 / 178
eye	0%	0	0 / 0	38%	1.32	30 / 80
muscle	19%	49.88	155 / 803	0%	0	0 / 0
peripheral blood	19%	262.22	172 / 929	0%	0	0 / 0
tonsil	0%	0	0 / 0	13%	0.30	6 / 45
adrenal gland	2%	2.48	4 / 258	10%	0.49	22 / 230
liver	0%	0	0 / 226	8%	0.27	33 / 406
lymph node	0%	0	0 / 0	3%	0.04	1 / 29
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1