Name | Number of supported studies | Average coverage | |
---|---|---|---|
chondrocyte | 4 studies | 51% ± 13% |
Insufficient scRNA-seq data for expression of COL11A2 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 2108.71 | 2628 / 2642 | 98% | 10.31 | 688 / 705 |
thymus | 100% | 1372.84 | 650 / 653 | 65% | 7.75 | 395 / 605 |
ovary | 94% | 388.84 | 170 / 180 | 51% | 2.47 | 219 / 430 |
uterus | 99% | 488.04 | 169 / 170 | 42% | 10.44 | 191 / 459 |
skin | 42% | 119.46 | 765 / 1809 | 83% | 55.68 | 392 / 472 |
prostate | 95% | 483.81 | 232 / 245 | 23% | 0.47 | 117 / 502 |
lung | 82% | 327.26 | 476 / 578 | 33% | 2.13 | 383 / 1155 |
kidney | 84% | 370.35 | 75 / 89 | 26% | 0.64 | 232 / 901 |
breast | 86% | 327.28 | 394 / 459 | 22% | 4.88 | 251 / 1118 |
spleen | 96% | 413.35 | 232 / 241 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 95% | 22.54 | 76 / 80 |
blood vessel | 75% | 261.92 | 1004 / 1335 | 0% | 0 | 0 / 0 |
heart | 71% | 287.36 | 614 / 861 | 0% | 0 | 0 / 0 |
adipose | 67% | 240.40 | 809 / 1204 | 0% | 0 | 0 / 0 |
esophagus | 40% | 114.22 | 571 / 1445 | 26% | 2.18 | 48 / 183 |
intestine | 48% | 140.14 | 465 / 966 | 16% | 0.48 | 83 / 527 |
bladder | 38% | 111.52 | 8 / 21 | 22% | 0.87 | 109 / 504 |
adrenal gland | 8% | 31.47 | 20 / 258 | 47% | 1.69 | 109 / 230 |
stomach | 25% | 76.44 | 88 / 359 | 21% | 3.85 | 61 / 286 |
pancreas | 13% | 33.00 | 42 / 328 | 33% | 2.97 | 58 / 178 |
muscle | 40% | 158.86 | 325 / 803 | 0% | 0 | 0 / 0 |
liver | 24% | 71.35 | 55 / 226 | 16% | 1.50 | 64 / 406 |
lymph node | 0% | 0 | 0 / 0 | 24% | 0.35 | 7 / 29 |
tonsil | 0% | 0 | 0 / 0 | 20% | 0.49 | 9 / 45 |
peripheral blood | 10% | 42.34 | 90 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0001501 | Biological process | skeletal system development |
GO_0007605 | Biological process | sensory perception of sound |
GO_0030199 | Biological process | collagen fibril organization |
GO_0060021 | Biological process | roof of mouth development |
GO_0051216 | Biological process | cartilage development |
GO_0060023 | Biological process | soft palate development |
GO_0005615 | Cellular component | extracellular space |
GO_0005592 | Cellular component | collagen type XI trimer |
GO_0005788 | Cellular component | endoplasmic reticulum lumen |
GO_0005581 | Cellular component | collagen trimer |
GO_0005576 | Cellular component | extracellular region |
GO_0062023 | Cellular component | collagen-containing extracellular matrix |
GO_0008201 | Molecular function | heparin binding |
GO_0030020 | Molecular function | extracellular matrix structural constituent conferring tensile strength |
GO_0030674 | Molecular function | protein-macromolecule adaptor activity |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | COL11A2 |
Protein name | Collagen alpha2(XI) Collagen alpha-2(XI) chain COL11A2 (Collagen alpha-2(XI) chain) Collagen alpha-2(XI) chain (Collagen type XI alpha 2) COL11A2 (Collagen alpha-2(XI) chain) (Collagen type XI alpha 2 chain) (Collagen, type XI, alpha 2, isoform CRA_b) Collagen type XI alpha 2 Collagen type XI alpha 2 chain Collagen alpha-2(XI) chain (Collagen, type XI, alpha 2, isoform CRA_c) |
Synonyms | RP5-1033B10.5-001 hCG_2039805 RP5-1033B10.5-003 |
Description | FUNCTION: May play an important role in fibrillogenesis by controlling lateral growth of collagen II fibrils. |
Accessions | ENST00000374708.8 ENST00000383219.6 A0A0G2JL35 A0A0C4DFS1 A0A0G2JL78 ENST00000447741.6 [P13942-9] ENST00000551413.1 A0A140T9X7 ENST00000452044.5 ENST00000447349.5 ENST00000552473.4 ENST00000435763.6 A0A140T9A1 A0A0G2JHD9 ENST00000448717.5 ENST00000452937.6 [P13942-9] Q6LCP7 A0A140T9I7 A0A0G2JI07 ENST00000383087.6 [P13942-6] A0A140T9W8 ENST00000447855.5 ENST00000383088.8 [P13942-9] Q4VXY6 ENST00000549885.2 ENST00000433947.5 A0A140T9N1 ENST00000549811.3 [P13942-1] ENST00000434780.1 ENST00000395194.1 [P13942-9] A2AAS7 ENST00000438711.5 A0A140TA43 ENST00000361917.6 ENST00000425729.5 ENST00000443138.5 ENST00000420405.5 P13942 ENST00000551542.3 [P13942-8] ENST00000439039.6 [P13942-9] ENST00000341947.7 ENST00000552134.5 ENST00000443125.5 ENST00000452730.5 A0A140T9N0 A0A140TA54 H0YIS1 ENST00000550998.1 ENST00000451040.5 J3JS72 ENST00000551758.5 ENST00000549836.5 ENST00000549491.1 |