Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 9 studies | 22% ± 6% | |
plasmacytoid dendritic cell | 7 studies | 22% ± 6% | |
goblet cell | 5 studies | 31% ± 18% | |
CD16-negative, CD56-bright natural killer cell, human | 4 studies | 18% ± 2% | |
CD16-positive, CD56-dim natural killer cell, human | 4 studies | 21% ± 5% | |
classical monocyte | 4 studies | 20% ± 3% | |
mucosal invariant T cell | 4 studies | 19% ± 2% | |
epithelial cell | 4 studies | 33% ± 11% | |
astrocyte | 4 studies | 27% ± 8% | |
oligodendrocyte | 4 studies | 22% ± 5% | |
CD8-positive, alpha-beta T cell | 3 studies | 20% ± 2% | |
non-classical monocyte | 3 studies | 20% ± 5% | |
plasmablast | 3 studies | 36% ± 16% | |
microglial cell | 3 studies | 22% ± 4% | |
hepatocyte | 3 studies | 40% ± 18% | |
GABAergic neuron | 3 studies | 42% ± 3% | |
glutamatergic neuron | 3 studies | 53% ± 7% | |
oligodendrocyte precursor cell | 3 studies | 28% ± 6% | |
natural killer cell | 3 studies | 21% ± 2% | |
pancreatic A cell | 3 studies | 18% ± 1% | |
fibroblast | 3 studies | 18% ± 2% | |
macrophage | 3 studies | 22% ± 3% | |
basal cell | 3 studies | 27% ± 13% | |
gamma-delta T cell | 3 studies | 16% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2079.56 | 1445 / 1445 | 100% | 21.79 | 183 / 183 |
intestine | 100% | 2629.10 | 966 / 966 | 100% | 28.15 | 527 / 527 |
prostate | 100% | 3312.03 | 245 / 245 | 100% | 39.58 | 502 / 502 |
stomach | 100% | 2162.49 | 359 / 359 | 100% | 26.19 | 286 / 286 |
lung | 100% | 2378.39 | 578 / 578 | 100% | 16.91 | 1152 / 1155 |
breast | 100% | 2681.69 | 459 / 459 | 100% | 21.40 | 1114 / 1118 |
pancreas | 100% | 2474.94 | 328 / 328 | 99% | 19.46 | 177 / 178 |
bladder | 100% | 2729.81 | 21 / 21 | 99% | 19.73 | 501 / 504 |
brain | 99% | 1555.81 | 2622 / 2642 | 100% | 15.30 | 705 / 705 |
thymus | 100% | 2753.17 | 653 / 653 | 99% | 18.99 | 600 / 605 |
uterus | 100% | 3043.40 | 170 / 170 | 98% | 15.86 | 451 / 459 |
liver | 100% | 3321.56 | 226 / 226 | 98% | 16.38 | 398 / 406 |
kidney | 100% | 1791.58 | 89 / 89 | 98% | 14.87 | 880 / 901 |
ovary | 100% | 2989.56 | 180 / 180 | 96% | 10.17 | 414 / 430 |
adrenal gland | 100% | 3096.10 | 258 / 258 | 96% | 14.12 | 220 / 230 |
skin | 100% | 2680.04 | 1809 / 1809 | 94% | 16.23 | 443 / 472 |
adipose | 100% | 2343.83 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2266.12 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 1443.99 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2675.55 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.68 | 1 / 1 |
heart | 99% | 1467.04 | 849 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 11.37 | 44 / 45 |
lymph node | 0% | 0 | 0 / 0 | 97% | 10.43 | 28 / 29 |
eye | 0% | 0 | 0 / 0 | 74% | 7.65 | 59 / 80 |
peripheral blood | 74% | 952.02 | 684 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006890 | Biological process | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum |
GO_0006886 | Biological process | intracellular protein transport |
GO_0033365 | Biological process | protein localization to organelle |
GO_0000301 | Biological process | retrograde transport, vesicle recycling within Golgi |
GO_0070085 | Biological process | glycosylation |
GO_0007030 | Biological process | Golgi organization |
GO_0050821 | Biological process | protein stabilization |
GO_0006891 | Biological process | intra-Golgi vesicle-mediated transport |
GO_0006888 | Biological process | endoplasmic reticulum to Golgi vesicle-mediated transport |
GO_0006486 | Biological process | protein glycosylation |
GO_0005801 | Cellular component | cis-Golgi network |
GO_0005886 | Cellular component | plasma membrane |
GO_0017119 | Cellular component | Golgi transport complex |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0032588 | Cellular component | trans-Golgi network membrane |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005829 | Cellular component | cytosol |
GO_0032580 | Cellular component | Golgi cisterna membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | COG3 |
Protein name | Conserved oligomeric Golgi complex subunit 3 (COG complex subunit 3) (Component of oligomeric Golgi complex 3) (Vesicle-docking protein SEC34 homolog) (p94) Component of oligomeric golgi complex 3 |
Synonyms | SEC34 |
Description | FUNCTION: Involved in ER-Golgi transport. . |
Accessions | Q96JB2 ENST00000476702.1 A0A087WYY9 ENST00000486940.2 ENST00000349995.10 [Q96JB2-1] A0A087WTH9 ENST00000617493.1 [Q96JB2-2] |