Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 17 studies | 58% ± 19% | |
neuron | 3 studies | 33% ± 17% | |
endothelial cell | 3 studies | 21% ± 5% | |
glutamatergic neuron | 3 studies | 31% ± 13% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 9 studies | 34% ± 15% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 16003.25 | 2639 / 2642 | 95% | 28.06 | 668 / 705 |
intestine | 28% | 405.77 | 268 / 966 | 1% | 0.01 | 4 / 527 |
adrenal gland | 1% | 13.08 | 3 / 258 | 20% | 1.05 | 45 / 230 |
esophagus | 8% | 97.61 | 117 / 1445 | 3% | 0.06 | 5 / 183 |
tonsil | 0% | 0 | 0 / 0 | 9% | 0.59 | 4 / 45 |
stomach | 4% | 54.97 | 15 / 359 | 2% | 0.04 | 7 / 286 |
breast | 0% | 0 | 0 / 459 | 5% | 0.14 | 57 / 1118 |
prostate | 2% | 30.93 | 6 / 245 | 1% | 0.01 | 4 / 502 |
uterus | 1% | 6.42 | 1 / 170 | 2% | 0.16 | 10 / 459 |
lung | 0% | 0 | 0 / 578 | 3% | 0.38 | 31 / 1155 |
pancreas | 0% | 0 | 0 / 328 | 2% | 0.06 | 4 / 178 |
blood vessel | 2% | 20.27 | 21 / 1335 | 0% | 0 | 0 / 0 |
skin | 0% | 0.51 | 1 / 1809 | 1% | 0.06 | 7 / 472 |
eye | 0% | 0 | 0 / 0 | 1% | 0.04 | 1 / 80 |
bladder | 0% | 0 | 0 / 21 | 1% | 0.05 | 6 / 504 |
ovary | 0% | 0 | 0 / 180 | 1% | 0.03 | 5 / 430 |
thymus | 0% | 1.50 | 1 / 653 | 1% | 0.03 | 5 / 605 |
heart | 1% | 7.80 | 7 / 861 | 0% | 0 | 0 / 0 |
kidney | 0% | 0 | 0 / 89 | 1% | 0.02 | 5 / 901 |
adipose | 0% | 5.67 | 6 / 1204 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 0% | 0.01 | 1 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0045163 | Biological process | clustering of voltage-gated potassium channels |
GO_0007411 | Biological process | axon guidance |
GO_0007155 | Biological process | cell adhesion |
GO_0071206 | Biological process | establishment of protein localization to juxtaparanode region of axon |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0002023 | Biological process | reduction of food intake in response to dietary excess |
GO_0097090 | Biological process | presynaptic membrane organization |
GO_0050808 | Biological process | synapse organization |
GO_0071205 | Biological process | protein localization to juxtaparanode region of axon |
GO_0045444 | Biological process | fat cell differentiation |
GO_0070593 | Biological process | dendrite self-avoidance |
GO_0043209 | Cellular component | myelin sheath |
GO_0005886 | Cellular component | plasma membrane |
GO_0043194 | Cellular component | axon initial segment |
GO_0045202 | Cellular component | synapse |
GO_0044224 | Cellular component | juxtaparanode region of axon |
GO_0045211 | Cellular component | postsynaptic membrane |
GO_0033268 | Cellular component | node of Ranvier |
GO_0098552 | Cellular component | side of membrane |
GO_0030424 | Cellular component | axon |
GO_0098632 | Molecular function | cell-cell adhesion mediator activity |
GO_0005515 | Molecular function | protein binding |
Gene name | CNTN2 |
Protein name | Contactin 2 Alternative protein CNTN2 Contactin 2 (Axonal) Contactin-2 (Axonal glycoprotein TAG-1) (Axonin-1) (Transient axonal glycoprotein 1) (TAX-1) |
Synonyms | AXT TAX1 TAG1 |
Description | FUNCTION: In conjunction with another transmembrane protein, CNTNAP2, contributes to the organization of axonal domains at nodes of Ranvier by maintaining voltage-gated potassium channels at the juxtaparanodal region. May be involved in cell adhesion. . |
Accessions | ENST00000640352.1 ENST00000638577.1 L8ECB9 Q02246 A0A1B0GTL7 ENST00000636312.2 A1L3A3 ENST00000639302.1 A0A1W2PQ11 ENST00000639843.1 ENST00000640326.1 A0A1W2PPY1 ENST00000638378.1 A0A1W2PPQ9 ENST00000331830.7 A0A1W2PQJ4 ENST00000640428.1 ENST00000639971.1 A0A1W2PR60 ENST00000639122.1 ENST00000532366.2 A0A1W2PQ86 |