Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| glutamatergic neuron | 9 studies | 35% ± 22% | |
| astrocyte | 9 studies | 33% ± 17% | |
| oligodendrocyte precursor cell | 8 studies | 28% ± 11% | |
| GABAergic neuron | 6 studies | 37% ± 19% | |
| interneuron | 5 studies | 38% ± 22% | |
| endothelial cell | 4 studies | 32% ± 12% | |
| oligodendrocyte | 3 studies | 27% ± 14% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 9 studies | 30% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 100% | 721.95 | 2641 / 2642 | 100% | 11.14 | 702 / 705 |
| thymus | 99% | 247.02 | 648 / 653 | 98% | 4.63 | 594 / 605 |
| breast | 99% | 235.69 | 455 / 459 | 94% | 3.62 | 1054 / 1118 |
| pancreas | 100% | 516.84 | 327 / 328 | 91% | 3.76 | 162 / 178 |
| skin | 92% | 192.16 | 1662 / 1809 | 98% | 22.94 | 464 / 472 |
| ovary | 100% | 400.11 | 180 / 180 | 82% | 1.94 | 353 / 430 |
| kidney | 100% | 219.90 | 89 / 89 | 76% | 1.67 | 684 / 901 |
| lung | 95% | 126.72 | 550 / 578 | 70% | 2.22 | 808 / 1155 |
| bladder | 100% | 180.00 | 21 / 21 | 62% | 2.37 | 310 / 504 |
| adrenal gland | 84% | 88.88 | 216 / 258 | 69% | 2.17 | 159 / 230 |
| prostate | 99% | 165.26 | 243 / 245 | 51% | 0.75 | 257 / 502 |
| uterus | 98% | 201.17 | 166 / 170 | 52% | 1.81 | 238 / 459 |
| stomach | 85% | 126.13 | 306 / 359 | 51% | 1.09 | 145 / 286 |
| intestine | 74% | 91.43 | 718 / 966 | 58% | 1.37 | 306 / 527 |
| esophagus | 77% | 84.70 | 1108 / 1445 | 42% | 1.03 | 76 / 183 |
| eye | 0% | 0 | 0 / 0 | 100% | 4.48 | 80 / 80 |
| adipose | 97% | 184.45 | 1162 / 1204 | 0% | 0 | 0 / 0 |
| spleen | 91% | 108.24 | 219 / 241 | 0% | 0 | 0 / 0 |
| blood vessel | 89% | 107.95 | 1185 / 1335 | 0% | 0 | 0 / 0 |
| liver | 29% | 29.13 | 66 / 226 | 39% | 0.89 | 160 / 406 |
| peripheral blood | 68% | 69.67 | 632 / 929 | 0% | 0 | 0 / 0 |
| muscle | 62% | 61.76 | 496 / 803 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 55% | 1.20 | 16 / 29 |
| heart | 34% | 30.51 | 292 / 861 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 31% | 0.67 | 14 / 45 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0016192 | Biological process | vesicle-mediated transport |
| GO_2000311 | Biological process | regulation of AMPA receptor activity |
| GO_0033116 | Cellular component | endoplasmic reticulum-Golgi intermediate compartment membrane |
| GO_0012507 | Cellular component | ER to Golgi transport vesicle membrane |
| GO_0045211 | Cellular component | postsynaptic membrane |
| GO_0045202 | Cellular component | synapse |
| GO_0032281 | Cellular component | AMPA glutamate receptor complex |
| GO_0005789 | Cellular component | endoplasmic reticulum membrane |
| GO_0043198 | Cellular component | dendritic shaft |
| GO_0030425 | Cellular component | dendrite |
| GO_0005515 | Molecular function | protein binding |
| Gene name | CNIH3 |
| Protein name | Protein cornichon homolog 3 (CNIH-3) (Cornichon family AMPA receptor auxiliary protein 3) |
| Synonyms | |
| Description | FUNCTION: Regulates the trafficking and gating properties of AMPA-selective glutamate receptors (AMPARs). Promotes their targeting to the cell membrane and synapses and modulates their gating properties by regulating their rates of activation, deactivation and desensitization. . |
| Accessions | ENST00000272133.4 Q8TBE1 |
