CIMIP1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	19 studies	76% ± 24%	Explore
deuterosomal cell	4 studies	57% ± 14%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	3 studies	27% ± 8%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
lung	74%	850.55	425 / 578	34%	21.74	397 / 1155
ovary	8%	7.16	15 / 180	40%	34.82	172 / 430
uterus	13%	177.70	22 / 170	12%	14.77	55 / 459
prostate	6%	4.83	15 / 245	9%	3.09	45 / 502
breast	1%	1.35	5 / 459	9%	5.38	101 / 1118
brain	8%	11.69	206 / 2642	0%	0.02	1 / 705
pancreas	0%	0	0 / 328	5%	6.64	9 / 178
bladder	0%	0	0 / 21	5%	1.29	23 / 504
thymus	1%	0.70	4 / 653	2%	0.22	12 / 605
intestine	0%	0.15	1 / 966	2%	0.60	10 / 527
kidney	1%	1.66	1 / 89	0%	0.04	3 / 901
stomach	0%	0	0 / 359	1%	0.08	3 / 286
skin	0%	0.17	4 / 1809	1%	0.28	3 / 472
esophagus	0%	0.18	1 / 1445	1%	0.08	1 / 183
peripheral blood	1%	9.01	5 / 929	0%	0	0 / 0
liver	0%	0.18	1 / 226	0%	0	0 / 406
adipose	0%	0.24	4 / 1204	0%	0	0 / 0
blood vessel	0%	0.16	4 / 1335	0%	0	0 / 0
muscle	0%	0.36	2 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
adrenal gland	0%	0	0 / 258	0%	0	0 / 230
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
heart	0%	0	0 / 861	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1