CFHR3 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
hepatocyte	3 studies	54% ± 12%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
liver	100%	15169.41	226 / 226	90%	74.73	367 / 406
lung	87%	26.63	500 / 578	34%	0.83	388 / 1155
ureter	0%	0	0 / 0	100%	1.06	1 / 1
bladder	76%	41.14	16 / 21	19%	0.48	97 / 504
ovary	89%	35.82	160 / 180	6%	0.09	27 / 430
thymus	88%	34.76	576 / 653	4%	0.30	26 / 605
blood vessel	91%	32.32	1213 / 1335	0%	0	0 / 0
adrenal gland	85%	24.21	219 / 258	0%	0.02	1 / 230
spleen	84%	60.31	202 / 241	0%	0	0 / 0
esophagus	61%	12.49	885 / 1445	22%	0.46	41 / 183
adipose	81%	28.58	975 / 1204	0%	0	0 / 0
kidney	74%	37.40	66 / 89	4%	0.10	35 / 901
breast	74%	21.61	338 / 459	4%	0.10	45 / 1118
intestine	63%	15.39	612 / 966	2%	0.18	9 / 527
heart	63%	16.94	539 / 861	0%	0	0 / 0
stomach	59%	10.43	211 / 359	3%	0.06	10 / 286
prostate	58%	12.25	141 / 245	0%	0	0 / 502
skin	41%	6.18	745 / 1809	7%	0.17	35 / 472
pancreas	38%	4.54	123 / 328	7%	0.13	13 / 178
uterus	29%	7.35	50 / 170	11%	0.20	50 / 459
muscle	17%	1.80	138 / 803	0%	0	0 / 0
brain	11%	1.03	281 / 2642	0%	0.01	2 / 705
peripheral blood	7%	4.90	68 / 929	0%	0	0 / 0
tonsil	0%	0	0 / 0	7%	0.09	3 / 45
lymph node	0%	0	0 / 0	3%	0.15	1 / 29
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0