Name | Number of supported studies | Average coverage | |
---|---|---|---|
natural killer cell | 25 studies | 30% ± 9% | |
CD16-positive, CD56-dim natural killer cell, human | 14 studies | 32% ± 8% | |
CD16-negative, CD56-bright natural killer cell, human | 9 studies | 25% ± 7% | |
mature NK T cell | 8 studies | 22% ± 6% | |
CD8-positive, alpha-beta T cell | 5 studies | 22% ± 5% | |
retinal cone cell | 5 studies | 24% ± 5% | |
astrocyte | 5 studies | 27% ± 9% | |
deuterosomal cell | 4 studies | 48% ± 3% | |
epithelial cell | 4 studies | 23% ± 6% | |
GABAergic neuron | 4 studies | 32% ± 11% | |
glutamatergic neuron | 4 studies | 46% ± 13% | |
oligodendrocyte precursor cell | 4 studies | 22% ± 9% | |
oligodendrocyte | 4 studies | 24% ± 5% | |
endothelial cell | 3 studies | 25% ± 10% | |
ciliated cell | 3 studies | 24% ± 7% | |
transit amplifying cell | 3 studies | 30% ± 9% | |
interneuron | 3 studies | 35% ± 16% | |
neuron | 3 studies | 25% ± 5% | |
gamma-delta T cell | 3 studies | 26% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1438.66 | 2641 / 2642 | 100% | 10.09 | 705 / 705 |
uterus | 100% | 1537.44 | 170 / 170 | 99% | 7.97 | 453 / 459 |
esophagus | 100% | 774.04 | 1444 / 1445 | 98% | 7.32 | 180 / 183 |
breast | 100% | 843.12 | 459 / 459 | 98% | 7.22 | 1095 / 1118 |
prostate | 100% | 1003.33 | 245 / 245 | 95% | 4.39 | 479 / 502 |
lung | 100% | 891.99 | 577 / 578 | 95% | 5.11 | 1098 / 1155 |
stomach | 100% | 706.72 | 359 / 359 | 95% | 5.92 | 271 / 286 |
intestine | 100% | 894.81 | 965 / 966 | 94% | 5.43 | 497 / 527 |
bladder | 100% | 969.10 | 21 / 21 | 94% | 5.21 | 474 / 504 |
ovary | 100% | 1403.57 | 180 / 180 | 90% | 4.24 | 388 / 430 |
thymus | 100% | 1081.38 | 653 / 653 | 89% | 4.27 | 540 / 605 |
skin | 99% | 1035.66 | 1795 / 1809 | 86% | 4.84 | 408 / 472 |
pancreas | 98% | 498.08 | 323 / 328 | 80% | 2.91 | 142 / 178 |
adrenal gland | 100% | 900.28 | 257 / 258 | 70% | 2.46 | 162 / 230 |
kidney | 100% | 742.90 | 89 / 89 | 70% | 2.54 | 627 / 901 |
liver | 100% | 583.77 | 225 / 226 | 51% | 1.87 | 206 / 406 |
lymph node | 0% | 0 | 0 / 0 | 100% | 5.82 | 29 / 29 |
spleen | 100% | 1256.56 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.22 | 1 / 1 |
adipose | 100% | 680.77 | 1200 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 696.47 | 1330 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 9.16 | 44 / 45 |
heart | 89% | 355.81 | 766 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 85% | 1071.62 | 792 / 929 | 0% | 0 | 0 / 0 |
muscle | 83% | 275.37 | 670 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 36% | 1.08 | 29 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0044782 | Biological process | cilium organization |
GO_0005814 | Cellular component | centriole |
GO_0005813 | Cellular component | centrosome |
GO_0036064 | Cellular component | ciliary basal body |
GO_0005829 | Cellular component | cytosol |
Gene name | CEP78 |
Protein name | Centrosomal protein 78 Centrosomal protein of 78 kDa (Cep78) |
Synonyms | C9orf81 |
Description | FUNCTION: May be required for efficient PLK4 centrosomal localization and PLK4-induced overduplication of centrioles . May play a role in cilium biogenesis . . |
Accessions | ENST00000647130.1 ENST00000376597.9 [Q5JTW2-2] A0A2R8Y7M8 A0A2R8YCP0 ENST00000643499.1 Q5JTW2 ENST00000643347.1 A0A2R8Y589 A0A2R8Y5W6 ENST00000376598.3 ENST00000647199.1 ENST00000645865.1 ENST00000642214.1 ENST00000643273.2 [Q5JTW2-3] ENST00000415759.6 [Q5JTW2-5] ENST00000643847.1 ENST00000424347.6 [Q5JTW2-1] A0A2R8Y7A4 ENST00000646288.1 A0A2R8Y4C1 A0A2R8YFB0 ENST00000644208.1 A0A2R8Y7U5 A0A2U3TZI9 A0A2R8Y432 ENST00000642669.1 [Q5JTW2-5] ENST00000645398.1 ENST00000642654.1 ENST00000277082.9 A8MST6 |