Name | Number of supported studies | Average coverage | |
---|---|---|---|
neuron | 6 studies | 42% ± 21% | |
oligodendrocyte precursor cell | 6 studies | 34% ± 10% | |
epithelial cell | 5 studies | 33% ± 18% | |
enterocyte | 4 studies | 23% ± 7% | |
GABAergic neuron | 4 studies | 28% ± 9% | |
glutamatergic neuron | 4 studies | 34% ± 12% | |
interneuron | 4 studies | 26% ± 12% | |
abnormal cell | 3 studies | 29% ± 3% | |
enteroendocrine cell | 3 studies | 30% ± 8% | |
goblet cell | 3 studies | 32% ± 11% | |
intestinal crypt stem cell | 3 studies | 26% ± 6% | |
neural crest cell | 3 studies | 55% ± 24% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
stomach | 100% | 876.25 | 359 / 359 | 99% | 32.03 | 284 / 286 |
intestine | 100% | 898.24 | 965 / 966 | 98% | 32.06 | 519 / 527 |
pancreas | 99% | 475.49 | 326 / 328 | 97% | 16.43 | 173 / 178 |
liver | 100% | 1162.83 | 226 / 226 | 96% | 20.79 | 390 / 406 |
prostate | 100% | 713.93 | 245 / 245 | 96% | 11.29 | 480 / 502 |
thymus | 100% | 527.65 | 651 / 653 | 82% | 11.86 | 499 / 605 |
brain | 100% | 1285.17 | 2639 / 2642 | 80% | 17.08 | 562 / 705 |
adrenal gland | 100% | 796.74 | 258 / 258 | 78% | 10.17 | 180 / 230 |
bladder | 100% | 628.76 | 21 / 21 | 78% | 18.07 | 394 / 504 |
lung | 98% | 428.52 | 569 / 578 | 79% | 12.42 | 914 / 1155 |
breast | 100% | 631.70 | 459 / 459 | 67% | 9.85 | 753 / 1118 |
uterus | 99% | 911.09 | 168 / 170 | 68% | 13.21 | 313 / 459 |
esophagus | 80% | 365.06 | 1151 / 1445 | 86% | 18.84 | 157 / 183 |
ovary | 100% | 888.06 | 180 / 180 | 60% | 7.80 | 259 / 430 |
kidney | 100% | 567.46 | 89 / 89 | 56% | 5.21 | 503 / 901 |
skin | 96% | 426.21 | 1736 / 1809 | 38% | 4.57 | 180 / 472 |
ureter | 0% | 0 | 0 / 0 | 100% | 28.60 | 1 / 1 |
muscle | 100% | 714.46 | 801 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 415.20 | 240 / 241 | 0% | 0 | 0 / 0 |
adipose | 100% | 511.86 | 1199 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 463.74 | 1318 / 1335 | 0% | 0 | 0 / 0 |
heart | 89% | 312.41 | 762 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 79% | 15.36 | 23 / 29 |
eye | 0% | 0 | 0 / 0 | 66% | 5.76 | 53 / 80 |
tonsil | 0% | 0 | 0 / 0 | 47% | 7.59 | 21 / 45 |
peripheral blood | 31% | 335.25 | 289 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0033044 | Biological process | regulation of chromosome organization |
GO_0051301 | Biological process | cell division |
GO_0034508 | Biological process | centromere complex assembly |
GO_0031508 | Biological process | pericentric heterochromatin formation |
GO_0001667 | Biological process | ameboidal-type cell migration |
GO_0032467 | Biological process | positive regulation of cytokinesis |
GO_0000776 | Cellular component | kinetochore |
GO_0030496 | Cellular component | midbody |
GO_0051233 | Cellular component | spindle midzone |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0015630 | Cellular component | microtubule cytoskeleton |
GO_0031965 | Cellular component | nuclear membrane |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0016846 | Molecular function | carbon-sulfur lyase activity |
GO_0046872 | Molecular function | metal ion binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | CENPV |
Protein name | Centromere protein V Centromere protein V (CENP-V) (Nuclear protein p30) (Proline-rich protein 6) |
Synonyms | PRR6 |
Description | FUNCTION: Required for distribution of pericentromeric heterochromatin in interphase nuclei and for centromere formation and organization, chromosome alignment and cytokinesis. . |
Accessions | ENST00000299736.5 [Q7Z7K6-3] A0A0M3HER2 Q7Z7K6 K7ERN6 ENST00000476243.5 ENST00000482983.1 |