Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| ciliated cell | 19 studies | 72% ± 18% | |
| astrocyte | 15 studies | 44% ± 22% | |
| glutamatergic neuron | 9 studies | 32% ± 15% | |
| adipocyte | 7 studies | 28% ± 5% | |
| interneuron | 5 studies | 30% ± 16% | |
| GABAergic neuron | 5 studies | 32% ± 9% | |
| granule cell | 4 studies | 41% ± 8% | |
| epithelial cell | 3 studies | 25% ± 6% | |
| GABAergic interneuron | 3 studies | 17% ± 1% | |
| neuron | 3 studies | 34% ± 17% | |
| hepatocyte | 3 studies | 31% ± 14% | |
| ependymal cell | 3 studies | 52% ± 22% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 97% | 780.68 | 2564 / 2642 | 85% | 2.23 | 596 / 705 |
| intestine | 100% | 1268.35 | 962 / 966 | 75% | 1.64 | 397 / 527 |
| kidney | 96% | 385.13 | 85 / 89 | 79% | 2.71 | 714 / 901 |
| stomach | 100% | 505.10 | 359 / 359 | 66% | 1.28 | 188 / 286 |
| lung | 94% | 1892.25 | 541 / 578 | 56% | 3.13 | 646 / 1155 |
| liver | 88% | 265.98 | 199 / 226 | 61% | 1.21 | 246 / 406 |
| breast | 97% | 320.78 | 444 / 459 | 47% | 2.70 | 521 / 1118 |
| ovary | 99% | 443.57 | 178 / 180 | 27% | 1.17 | 117 / 430 |
| adrenal gland | 63% | 106.43 | 162 / 258 | 63% | 1.57 | 145 / 230 |
| skin | 77% | 184.16 | 1394 / 1809 | 46% | 1.00 | 215 / 472 |
| thymus | 99% | 509.74 | 649 / 653 | 21% | 0.35 | 128 / 605 |
| prostate | 89% | 211.92 | 219 / 245 | 26% | 0.82 | 132 / 502 |
| bladder | 86% | 188.05 | 18 / 21 | 28% | 1.02 | 143 / 504 |
| esophagus | 69% | 954.46 | 998 / 1445 | 44% | 1.17 | 81 / 183 |
| uterus | 81% | 557.22 | 138 / 170 | 27% | 0.91 | 124 / 459 |
| pancreas | 50% | 89.06 | 165 / 328 | 49% | 1.74 | 88 / 178 |
| adipose | 98% | 359.65 | 1180 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 66% | 112.24 | 875 / 1335 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 52% | 4.32 | 15 / 29 |
| heart | 27% | 82.55 | 234 / 861 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 20% | 0.35 | 9 / 45 |
| spleen | 8% | 9.85 | 20 / 241 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 8% | 0.12 | 6 / 80 |
| muscle | 6% | 9.29 | 51 / 803 | 0% | 0 | 0 / 0 |
| peripheral blood | 6% | 10.08 | 52 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0007043 | Biological process | cell-cell junction assembly |
| GO_0034332 | Biological process | adherens junction organization |
| GO_0007275 | Biological process | multicellular organism development |
| GO_0044331 | Biological process | cell-cell adhesion mediated by cadherin |
| GO_0046718 | Biological process | symbiont entry into host cell |
| GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
| GO_0016339 | Biological process | calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules |
| GO_0000902 | Biological process | cell morphogenesis |
| GO_0016477 | Biological process | cell migration |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0043679 | Cellular component | axon terminus |
| GO_0016342 | Cellular component | catenin complex |
| GO_0005912 | Cellular component | adherens junction |
| GO_0043083 | Cellular component | synaptic cleft |
| GO_0045296 | Molecular function | cadherin binding |
| GO_0008013 | Molecular function | beta-catenin binding |
| GO_0001618 | Molecular function | virus receptor activity |
| GO_0005509 | Molecular function | calcium ion binding |
| GO_0005515 | Molecular function | protein binding |
| Gene name | CDHR3 |
| Protein name | Cadherin-related family member 3 (Cadherin-like protein 28) Cadherin related family member 3 |
| Synonyms | CDH28 |
| Description | FUNCTION: Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types.; FUNCTION: (Microbial infection) Acts as a receptor for human rhinovirus C. . |
| Accessions | ENST00000466045.1 F8WF00 E7EQG5 H7C548 ENST00000468477.1 ENST00000478080.5 ENST00000496633.1 ENST00000317716.14 [Q6ZTQ4-1] Q6ZTQ4 E9PEI5 ENST00000488386.5 H7C555 |
