CDH4 | OmnibusX

Name	Number of supported studies	Average coverage
astrocyte	17 studies	39% ± 21%	Explore
oligodendrocyte precursor cell	10 studies	35% ± 13%	Explore
GABAergic neuron	8 studies	41% ± 20%	Explore
glutamatergic neuron	7 studies	39% ± 20%	Explore
interneuron	5 studies	52% ± 21%	Explore
Mueller cell	4 studies	28% ± 6%	Explore
ependymal cell	3 studies	28% ± 15%	Explore
oligodendrocyte	3 studies	36% ± 27%	Explore

Name	Number of supported studies	Average coverage
brain	10 studies	31% ± 18%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	97%	2005.03	2564 / 2642	97%	19.33	685 / 705
ovary	96%	2437.82	173 / 180	8%	0.59	33 / 430
spleen	100%	1248.04	241 / 241	0%	0	0 / 0
adrenal gland	43%	430.44	110 / 258	39%	4.36	90 / 230
skin	58%	612.75	1049 / 1809	20%	1.64	93 / 472
kidney	19%	53.02	17 / 89	56%	10.87	508 / 901
thymus	4%	9.92	27 / 653	70%	10.40	422 / 605
muscle	36%	96.11	291 / 803	0%	0	0 / 0
esophagus	23%	72.72	338 / 1445	11%	1.05	21 / 183
eye	0%	0	0 / 0	34%	1.61	27 / 80
pancreas	18%	44.98	59 / 328	10%	0.94	18 / 178
lung	15%	53.89	88 / 578	11%	0.90	123 / 1155
prostate	22%	64.17	54 / 245	1%	0.02	5 / 502
uterus	12%	41.41	20 / 170	9%	0.94	40 / 459
breast	8%	23.14	39 / 459	5%	0.44	60 / 1118
intestine	9%	22.92	91 / 966	2%	0.47	12 / 527
bladder	5%	9.00	1 / 21	2%	0.12	11 / 504
stomach	3%	7.19	11 / 359	3%	0.24	10 / 286
liver	0%	1.31	1 / 226	2%	0.16	10 / 406
tonsil	0%	0	0 / 0	2%	0.29	1 / 45
heart	2%	4.66	16 / 861	0%	0	0 / 0
blood vessel	1%	3.84	15 / 1335	0%	0	0 / 0
adipose	0%	1.18	5 / 1204	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0007043	Biological process	cell-cell junction assembly
GO_0034332	Biological process	adherens junction organization
GO_0045773	Biological process	positive regulation of axon extension
GO_0007275	Biological process	multicellular organism development
GO_0007155	Biological process	cell adhesion
GO_0044331	Biological process	cell-cell adhesion mediated by cadherin
GO_0007156	Biological process	homophilic cell adhesion via plasma membrane adhesion molecules
GO_0016339	Biological process	calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO_0048675	Biological process	axon extension
GO_0000902	Biological process	cell morphogenesis
GO_0007157	Biological process	heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO_0016477	Biological process	cell migration
GO_0007411	Biological process	axon guidance
GO_0005886	Cellular component	plasma membrane
GO_0016342	Cellular component	catenin complex
GO_0005912	Cellular component	adherens junction
GO_0045296	Molecular function	cadherin binding
GO_0008013	Molecular function	beta-catenin binding
GO_0005509	Molecular function	calcium ion binding

Gene name	CDH4
Protein name	Cadherin-4 (Retinal cadherin) (R-CAD) (R-cadherin) Cadherin-4
Synonyms
Description	FUNCTION: Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types. May play an important role in retinal development. FUNCTION: Cadherins are calcium-dependent cell adhesion proteins. . FUNCTION: Cadherins are calcium-dependent cell adhesion proteins. .
Accessions	ENST00000611855.4 ENST00000625686.1 P55283 ENST00000628489.2 ENST00000543233.2 [P55283-2] ENST00000629889.2 A0A087WX99 A0A0G2JRA4 ENST00000614565.5 [P55283-1]

CDH4 report