CCDC40 | OmnibusX

Name	Number of supported studies	Average coverage
ciliated cell	15 studies	41% ± 15%	Explore
astrocyte	3 studies	26% ± 6%	Explore

Name	Number of supported studies	Average coverage
brain	3 studies	17% ± 2%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	100%	1165.91	244 / 245	100%	4.21	500 / 502
brain	98%	674.54	2579 / 2642	98%	4.88	693 / 705
kidney	100%	975.56	89 / 89	91%	4.92	820 / 901
breast	99%	680.27	454 / 459	91%	4.72	1013 / 1118
thymus	100%	1227.31	653 / 653	87%	2.43	529 / 605
ovary	100%	455.52	180 / 180	86%	4.32	371 / 430
pancreas	91%	285.27	300 / 328	85%	2.39	152 / 178
lung	99%	1029.24	574 / 578	72%	2.40	829 / 1155
adrenal gland	99%	549.81	255 / 258	72%	1.85	166 / 230
bladder	100%	478.67	21 / 21	57%	1.22	285 / 504
skin	79%	198.70	1427 / 1809	70%	1.48	330 / 472
uterus	99%	1107.18	168 / 170	49%	2.37	227 / 459
intestine	96%	564.98	930 / 966	42%	0.83	222 / 527
esophagus	83%	531.28	1199 / 1445	55%	1.20	100 / 183
stomach	90%	353.01	322 / 359	45%	0.93	128 / 286
liver	65%	152.50	146 / 226	35%	0.90	144 / 406
ureter	0%	0	0 / 0	100%	1.32	1 / 1
adipose	98%	458.29	1184 / 1204	0%	0	0 / 0
blood vessel	95%	312.03	1269 / 1335	0%	0	0 / 0
heart	93%	391.13	797 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	90%	1.96	72 / 80
spleen	81%	284.11	196 / 241	0%	0	0 / 0
muscle	40%	89.26	321 / 803	0%	0	0 / 0
tonsil	0%	0	0 / 0	13%	0.22	6 / 45
lymph node	0%	0	0 / 0	3%	0.06	1 / 29
peripheral blood	1%	3.82	9 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0071910	Biological process	determination of liver left/right asymmetry
GO_0030324	Biological process	lung development
GO_0060287	Biological process	epithelial cilium movement involved in determination of left/right asymmetry
GO_0001947	Biological process	heart looping
GO_0044458	Biological process	motile cilium assembly
GO_0035469	Biological process	determination of pancreatic left/right asymmetry
GO_0003356	Biological process	regulation of cilium beat frequency
GO_0071907	Biological process	determination of digestive tract left/right asymmetry
GO_0003351	Biological process	epithelial cilium movement involved in extracellular fluid movement
GO_0070286	Biological process	axonemal dynein complex assembly
GO_0030317	Biological process	flagellated sperm motility
GO_0035082	Biological process	axoneme assembly
GO_0003341	Biological process	cilium movement
GO_0036159	Biological process	inner dynein arm assembly
GO_0005576	Cellular component	extracellular region
GO_0005930	Cellular component	axoneme
GO_0005929	Cellular component	cilium
GO_0005737	Cellular component	cytoplasm
GO_0003674	Molecular function	molecular_function

Gene name	CCDC40
Protein name	Coiled-coil domain containing 40 Coiled-coil domain-containing protein 40
Synonyms	KIAA1640
Description	FUNCTION: Required for assembly of dynein regulatory complex (DRC) and inner dynein arm (IDA) complexes, which are responsible for ciliary beat regulation, thereby playing a central role in motility in cilia and flagella . Probably acts together with CCDC39 to form a molecular ruler that determines the 96 nanometer (nm) repeat length and arrangements of components in cilia and flagella (By similarity). Not required for outer dynein arm complexes assembly. Required for axonemal recruitment of CCDC39 . .
Accessions	ENST00000707762.1 [Q4G0X9-1] ENST00000269318.9 [Q4G0X9-4] ENST00000374876.4 [Q4G0X9-5] ENST00000576033.5 ENST00000573474.5 ENST00000574099.1 ENST00000374877.7 [Q4G0X9-2] ENST00000571028.1 Q4G0X9 ENST00000707761.1 [Q4G0X9-2] I3L2X6 ENST00000707764.1 [Q4G0X9-4] I3L292 I3L3G6 I3L477 ENST00000397545.9 [Q4G0X9-1] ENST00000707765.1 [Q4G0X9-5]

CCDC40 report