CCDC39 | OmnibusX

Name	Number of supported studies	Average coverage
ciliated cell	14 studies	42% ± 14%	Explore
glutamatergic neuron	3 studies	56% ± 24%	Explore

Name	Number of supported studies	Average coverage
brain	3 studies	40% ± 30%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
bladder	100%	529.86	21 / 21	1%	0.01	3 / 504
lung	99%	674.02	574 / 578	1%	0.02	11 / 1155
ovary	100%	1634.41	180 / 180	0%	0	0 / 430
spleen	100%	635.78	241 / 241	0%	0	0 / 0
uterus	100%	597.89	170 / 170	0%	0	0 / 459
breast	100%	697.32	457 / 459	0%	0.01	4 / 1118
thymus	100%	558.98	651 / 653	0%	0	0 / 605
adipose	100%	840.34	1199 / 1204	0%	0	0 / 0
muscle	99%	709.98	795 / 803	0%	0	0 / 0
intestine	98%	388.10	950 / 966	0%	0	0 / 527
blood vessel	98%	380.11	1307 / 1335	0%	0	0 / 0
prostate	98%	306.09	239 / 245	0%	0	0 / 502
esophagus	97%	368.89	1395 / 1445	1%	0.01	1 / 183
skin	96%	399.47	1744 / 1809	0%	0	0 / 472
adrenal gland	94%	213.78	242 / 258	0%	0	0 / 230
stomach	92%	271.03	331 / 359	1%	0.02	2 / 286
pancreas	91%	203.39	299 / 328	1%	0.01	1 / 178
brain	85%	327.80	2257 / 2642	0%	0.00	2 / 705
heart	79%	181.56	680 / 861	0%	0	0 / 0
kidney	75%	166.94	67 / 89	0%	0.01	4 / 901
liver	50%	73.57	112 / 226	0%	0	0 / 406
peripheral blood	22%	75.60	204 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0071910	Biological process	determination of liver left/right asymmetry
GO_0061512	Biological process	protein localization to cilium
GO_0030324	Biological process	lung development
GO_0060287	Biological process	epithelial cilium movement involved in determination of left/right asymmetry
GO_0001947	Biological process	heart looping
GO_0044458	Biological process	motile cilium assembly
GO_0035469	Biological process	determination of pancreatic left/right asymmetry
GO_0003356	Biological process	regulation of cilium beat frequency
GO_0051649	Biological process	establishment of localization in cell
GO_0071907	Biological process	determination of digestive tract left/right asymmetry
GO_0061966	Biological process	establishment of left/right asymmetry
GO_0070286	Biological process	axonemal dynein complex assembly
GO_0060285	Biological process	cilium-dependent cell motility
GO_0090660	Biological process	cerebrospinal fluid circulation
GO_0030317	Biological process	flagellated sperm motility
GO_0007420	Biological process	brain development
GO_0003341	Biological process	cilium movement
GO_0036159	Biological process	inner dynein arm assembly
GO_0005576	Cellular component	extracellular region
GO_0005930	Cellular component	axoneme
GO_0005929	Cellular component	cilium
GO_0005829	Cellular component	cytosol

Gene name	CCDC39
Protein name	Coiled-coil domain-containing protein 39
Synonyms
Description	FUNCTION: Required for assembly of dynein regulatory complex (DRC) and inner dynein arm (IDA) complexes, which are responsible for ciliary beat regulation, thereby playing a central role in motility in cilia and flagella . Probably acts together with CCDC40 to form a molecular ruler that determines the 96 nanometer (nm) repeat length and arrangements of components in cilia and flagella (By similarity). Not required for outer dynein arm complexes assembly . .
Accessions	ENST00000476379.6 [Q9UFE4-1] ENST00000489868.6 ENST00000473854.5 Q9UFE4 ENST00000651046.1 H7C5I6 A0A494C1Q3 H7C4X6

CCDC39 report