Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 12 studies | 33% ± 14% | |
epithelial cell | 7 studies | 34% ± 14% | |
transit amplifying cell | 5 studies | 24% ± 8% | |
deuterosomal cell | 4 studies | 38% ± 6% | |
connective tissue cell | 4 studies | 20% ± 2% | |
intestinal crypt stem cell | 4 studies | 24% ± 3% | |
erythroblast | 4 studies | 34% ± 20% | |
endothelial cell | 3 studies | 20% ± 4% | |
glutamatergic neuron | 3 studies | 32% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
intestine | 3 studies | 21% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 472.27 | 180 / 180 | 100% | 22.34 | 429 / 430 |
brain | 100% | 672.77 | 2639 / 2642 | 99% | 14.47 | 698 / 705 |
prostate | 100% | 413.09 | 244 / 245 | 99% | 13.01 | 496 / 502 |
intestine | 99% | 351.98 | 955 / 966 | 99% | 23.23 | 523 / 527 |
breast | 99% | 391.36 | 456 / 459 | 99% | 22.75 | 1103 / 1118 |
thymus | 100% | 367.40 | 650 / 653 | 98% | 13.03 | 593 / 605 |
uterus | 98% | 346.27 | 166 / 170 | 99% | 27.48 | 455 / 459 |
stomach | 96% | 265.59 | 344 / 359 | 99% | 23.34 | 283 / 286 |
bladder | 95% | 318.95 | 20 / 21 | 99% | 19.52 | 500 / 504 |
pancreas | 98% | 275.85 | 321 / 328 | 96% | 10.82 | 171 / 178 |
kidney | 98% | 336.51 | 87 / 89 | 93% | 10.66 | 842 / 901 |
skin | 100% | 556.99 | 1803 / 1809 | 90% | 13.54 | 424 / 472 |
adrenal gland | 99% | 421.90 | 255 / 258 | 87% | 10.21 | 201 / 230 |
esophagus | 87% | 280.72 | 1252 / 1445 | 96% | 17.11 | 175 / 183 |
lung | 83% | 182.69 | 477 / 578 | 97% | 19.56 | 1124 / 1155 |
liver | 69% | 116.74 | 156 / 226 | 83% | 11.66 | 336 / 406 |
lymph node | 0% | 0 | 0 / 0 | 100% | 19.79 | 29 / 29 |
spleen | 100% | 286.92 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 28.76 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.50 | 1 / 1 |
adipose | 97% | 233.08 | 1163 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 83% | 145.70 | 1103 / 1335 | 0% | 0 | 0 / 0 |
heart | 82% | 184.22 | 706 / 861 | 0% | 0 | 0 / 0 |
muscle | 74% | 137.89 | 598 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 34% | 2.21 | 27 / 80 |
peripheral blood | 30% | 332.87 | 275 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007283 | Biological process | spermatogenesis |
GO_0097225 | Cellular component | sperm midpiece |
Gene name | CCDC34 |
Protein name | Coiled-coil domain-containing protein 34 (Renal carcinoma antigen NY-REN-41) |
Synonyms | RAMA3 L15 |
Description | FUNCTION: Involved in spermatogenesis. Has a probable role in anterograde intraflagellar transport which is essential for the formation of sperm flagella. . |
Accessions | Q96HJ3 ENST00000328697.11 [Q96HJ3-1] ENST00000317945.6 [Q96HJ3-2] |