Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 21 studies | 70% ± 19% | |
macrophage | 6 studies | 28% ± 6% | |
deuterosomal cell | 4 studies | 41% ± 5% | |
epithelial cell | 4 studies | 32% ± 14% | |
adipocyte | 3 studies | 20% ± 1% | |
glutamatergic neuron | 3 studies | 21% ± 2% | |
ependymal cell | 3 studies | 51% ± 11% | |
monocyte | 3 studies | 23% ± 6% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 3 studies | 23% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 568.06 | 652 / 653 | 80% | 5.84 | 484 / 605 |
breast | 99% | 480.65 | 455 / 459 | 79% | 18.02 | 883 / 1118 |
ovary | 99% | 1104.16 | 179 / 180 | 71% | 5.20 | 307 / 430 |
lung | 93% | 472.38 | 537 / 578 | 41% | 3.03 | 479 / 1155 |
adrenal gland | 100% | 888.54 | 258 / 258 | 23% | 1.37 | 53 / 230 |
uterus | 96% | 338.91 | 164 / 170 | 17% | 1.51 | 76 / 459 |
intestine | 43% | 39.37 | 415 / 966 | 57% | 3.58 | 298 / 527 |
kidney | 73% | 91.10 | 65 / 89 | 25% | 0.98 | 224 / 901 |
spleen | 98% | 196.89 | 235 / 241 | 0% | 0 | 0 / 0 |
brain | 59% | 142.86 | 1547 / 2642 | 38% | 1.97 | 270 / 705 |
adipose | 96% | 330.12 | 1151 / 1204 | 0% | 0 | 0 / 0 |
prostate | 78% | 84.13 | 190 / 245 | 12% | 0.48 | 62 / 502 |
bladder | 62% | 76.95 | 13 / 21 | 23% | 1.28 | 115 / 504 |
stomach | 23% | 17.98 | 84 / 359 | 61% | 4.06 | 174 / 286 |
blood vessel | 65% | 82.58 | 864 / 1335 | 0% | 0 | 0 / 0 |
liver | 25% | 18.23 | 56 / 226 | 39% | 3.90 | 160 / 406 |
pancreas | 14% | 12.30 | 46 / 328 | 46% | 1.70 | 81 / 178 |
skin | 47% | 59.52 | 852 / 1809 | 7% | 0.24 | 33 / 472 |
heart | 44% | 49.64 | 383 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 42% | 49.66 | 392 / 929 | 0% | 0 | 0 / 0 |
esophagus | 15% | 11.40 | 215 / 1445 | 23% | 1.14 | 43 / 183 |
lymph node | 0% | 0 | 0 / 0 | 17% | 0.49 | 5 / 29 |
tonsil | 0% | 0 | 0 / 0 | 7% | 0.15 | 3 / 45 |
muscle | 4% | 2.96 | 32 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0000226 | Biological process | microtubule cytoskeleton organization |
GO_0030054 | Cellular component | cell junction |
GO_0036064 | Cellular component | ciliary basal body |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005515 | Molecular function | protein binding |
GO_0008017 | Molecular function | microtubule binding |
Gene name | CCDC170 |
Protein name | Coiled-coil domain-containing protein 170 |
Synonyms | C6orf97 |
Description | FUNCTION: Plays a role in Golgi-associated microtubules organization and stabilization. . |
Accessions | Q8IYT3 ENST00000239374.8 |