Name | Number of supported studies | Average coverage | |
---|---|---|---|
gamma-delta T cell | 4 studies | 17% ± 2% | |
CD4-positive, alpha-beta T cell | 3 studies | 17% ± 2% | |
epithelial cell | 3 studies | 24% ± 7% | |
GABAergic neuron | 3 studies | 19% ± 3% | |
glutamatergic neuron | 3 studies | 28% ± 5% | |
natural killer cell | 3 studies | 19% ± 1% | |
CD16-positive, CD56-dim natural killer cell, human | 3 studies | 18% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 19% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1608.17 | 459 / 459 | 100% | 28.69 | 1118 / 1118 |
esophagus | 100% | 1923.50 | 1445 / 1445 | 100% | 24.96 | 183 / 183 |
intestine | 100% | 1743.33 | 966 / 966 | 100% | 21.77 | 527 / 527 |
ovary | 100% | 1598.42 | 180 / 180 | 100% | 22.10 | 430 / 430 |
prostate | 100% | 1665.91 | 245 / 245 | 100% | 30.59 | 502 / 502 |
stomach | 100% | 1213.16 | 359 / 359 | 100% | 22.47 | 286 / 286 |
uterus | 100% | 1643.62 | 170 / 170 | 100% | 16.97 | 458 / 459 |
brain | 100% | 1165.79 | 2633 / 2642 | 100% | 27.55 | 705 / 705 |
lung | 99% | 1201.60 | 575 / 578 | 100% | 19.71 | 1155 / 1155 |
bladder | 100% | 1438.14 | 21 / 21 | 99% | 17.48 | 501 / 504 |
thymus | 100% | 1359.51 | 653 / 653 | 99% | 18.98 | 601 / 605 |
skin | 100% | 1683.48 | 1809 / 1809 | 99% | 24.61 | 468 / 472 |
kidney | 100% | 875.31 | 89 / 89 | 98% | 17.38 | 886 / 901 |
pancreas | 98% | 802.02 | 323 / 328 | 99% | 14.55 | 176 / 178 |
liver | 100% | 652.81 | 226 / 226 | 97% | 11.47 | 393 / 406 |
adrenal gland | 100% | 1106.05 | 258 / 258 | 97% | 12.15 | 222 / 230 |
adipose | 100% | 1414.11 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1223.50 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 19.02 | 29 / 29 |
muscle | 100% | 1951.41 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1410.93 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 19.49 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.92 | 1 / 1 |
heart | 97% | 830.38 | 835 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 93% | 1112.85 | 867 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 93% | 12.52 | 74 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016567 | Biological process | protein ubiquitination |
GO_0007162 | Biological process | negative regulation of cell adhesion |
GO_0045807 | Biological process | positive regulation of endocytosis |
GO_0030335 | Biological process | positive regulation of cell migration |
GO_0006397 | Biological process | mRNA processing |
GO_0030155 | Biological process | regulation of cell adhesion |
GO_0098609 | Biological process | cell-cell adhesion |
GO_0016607 | Cellular component | nuclear speck |
GO_0000151 | Cellular component | ubiquitin ligase complex |
GO_0005829 | Cellular component | cytosol |
GO_0036396 | Cellular component | RNA N6-methyladenosine methyltransferase complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0061630 | Molecular function | ubiquitin protein ligase activity |
GO_0004842 | Molecular function | ubiquitin-protein transferase activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | CBLL1 |
Protein name | Cbl proto-oncogene like 1 RING-type E3 ubiquitin transferase (EC 2.3.2.27) E3 ubiquitin-protein ligase Hakai (EC 2.3.2.27) (Casitas B-lineage lymphoma-transforming sequence-like protein 1) (c-Cbl-like protein 1) (RING finger protein 188) (RING-type E3 ubiquitin transferase Hakai) Alternative protein CBLL1 |
Synonyms | HAKAI RNF188 |
Description | FUNCTION: E3 ubiquitin-protein ligase that mediates ubiquitination of several tyrosine-phosphorylated Src substrates, including CDH1, CTTN and DOK1 (By similarity). Targets CDH1 for endocytosis and degradation (By similarity). Associated component of the WMM complex, a complex that mediates N6-methyladenosine (m6A) methylation of RNAs, a modification that plays a role in the efficiency of mRNA splicing and RNA processing . Its function in the WMM complex is unknown . . |
Accessions | L8ECK4 C9J2P9 A0A8V8TMY5 C9K074 F8WEM5 Q75N03 ENST00000440859.8 [Q75N03-1] ENST00000420796.1 ENST00000415884.6 ENST00000432748.5 ENST00000222597.7 [Q75N03-2] ENST00000698938.1 |