Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 10 studies | 37% ± 22% | |
endothelial cell of lymphatic vessel | 7 studies | 24% ± 6% | |
endothelial cell | 7 studies | 25% ± 8% | |
non-classical monocyte | 5 studies | 27% ± 13% | |
classical monocyte | 5 studies | 26% ± 10% | |
neuron | 5 studies | 20% ± 4% | |
epithelial cell | 4 studies | 20% ± 3% | |
myeloid cell | 3 studies | 19% ± 5% | |
GABAergic neuron | 3 studies | 35% ± 5% | |
interneuron | 3 studies | 25% ± 9% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 8 studies | 31% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 6388.49 | 245 / 245 | 100% | 186.37 | 502 / 502 |
stomach | 100% | 3827.52 | 359 / 359 | 100% | 27.98 | 286 / 286 |
breast | 100% | 4955.48 | 459 / 459 | 100% | 40.48 | 1117 / 1118 |
lung | 100% | 5019.59 | 577 / 578 | 100% | 29.13 | 1155 / 1155 |
intestine | 100% | 4467.09 | 966 / 966 | 100% | 29.02 | 526 / 527 |
kidney | 100% | 3131.16 | 89 / 89 | 100% | 30.84 | 898 / 901 |
bladder | 100% | 5088.62 | 21 / 21 | 100% | 27.87 | 502 / 504 |
uterus | 100% | 4887.22 | 170 / 170 | 100% | 28.96 | 457 / 459 |
ovary | 100% | 5284.47 | 180 / 180 | 100% | 24.13 | 428 / 430 |
thymus | 100% | 3913.38 | 652 / 653 | 100% | 24.05 | 603 / 605 |
esophagus | 100% | 4050.06 | 1444 / 1445 | 99% | 29.56 | 182 / 183 |
skin | 100% | 3723.94 | 1807 / 1809 | 99% | 27.42 | 469 / 472 |
brain | 98% | 21163.63 | 2590 / 2642 | 100% | 34.35 | 705 / 705 |
liver | 100% | 3340.21 | 225 / 226 | 98% | 21.36 | 399 / 406 |
pancreas | 93% | 1948.78 | 306 / 328 | 98% | 25.59 | 174 / 178 |
adrenal gland | 100% | 3320.17 | 258 / 258 | 90% | 15.78 | 208 / 230 |
adipose | 100% | 5229.55 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 37.39 | 29 / 29 |
spleen | 100% | 8305.02 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 29.67 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 11.48 | 1 / 1 |
blood vessel | 100% | 4590.50 | 1333 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 10807.55 | 916 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 18.46 | 75 / 80 |
heart | 93% | 2197.88 | 805 / 861 | 0% | 0 | 0 / 0 |
muscle | 51% | 814.87 | 408 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1903599 | Biological process | positive regulation of autophagy of mitochondrion |
GO_0045859 | Biological process | regulation of protein kinase activity |
GO_0034614 | Biological process | cellular response to reactive oxygen species |
GO_0061762 | Biological process | CAMKK-AMPK signaling cascade |
GO_0019722 | Biological process | calcium-mediated signaling |
GO_0000165 | Biological process | MAPK cascade |
GO_0001934 | Biological process | positive regulation of protein phosphorylation |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_0006468 | Biological process | protein phosphorylation |
GO_0046777 | Biological process | protein autophosphorylation |
GO_0005654 | Cellular component | nucleoplasm |
GO_0043005 | Cellular component | neuron projection |
GO_0005829 | Cellular component | cytosol |
GO_0106310 | Molecular function | protein serine kinase activity |
GO_0004713 | Molecular function | protein tyrosine kinase activity |
GO_0004674 | Molecular function | protein serine/threonine kinase activity |
GO_0005524 | Molecular function | ATP binding |
GO_0004683 | Molecular function | calmodulin-dependent protein kinase activity |
GO_0005516 | Molecular function | calmodulin binding |
GO_0005509 | Molecular function | calcium ion binding |
Gene name | CAMKK2 |
Protein name | Calcium/calmodulin-dependent protein kinase kinase 2 (CaM-KK 2) (CaM-kinase kinase 2) (CaMKK 2) (EC 2.7.11.17) (Calcium/calmodulin-dependent protein kinase kinase beta) (CaM-KK beta) (CaM-kinase kinase beta) (CaMKK beta) Calcium/calmodulin dependent protein kinase kinase 2 CAMKK beta protein |
Synonyms | CAMKKB KIAA0787 |
Description | FUNCTION: Calcium/calmodulin-dependent protein kinase belonging to a proposed calcium-triggered signaling cascade involved in a number of cellular processes. Isoform 1, isoform 2 and isoform 3 phosphorylate CAMK1 and CAMK4. Isoform 3 phosphorylates CAMK1D. Isoform 4, isoform 5 and isoform 6 lacking part of the calmodulin-binding domain are inactive. Efficiently phosphorylates 5'-AMP-activated protein kinase (AMPK) trimer, including that consisting of PRKAA1, PRKAB1 and PRKAG1. This phosphorylation is stimulated in response to Ca(2+) signals (By similarity). Seems to be involved in hippocampal activation of CREB1 (By similarity). May play a role in neurite growth. Isoform 3 may promote neurite elongation, while isoform 1 may promoter neurite branching. . |
Accessions | F5GZ00 ENST00000324774.9 [Q96RR4-1] ENST00000412367.6 [Q96RR4-3] ENST00000538733.5 [Q96RR4-5] Q96RR4 Q8IZW1 ENST00000652382.1 [Q96RR4-1] ENST00000543477.1 ENST00000404169.8 [Q96RR4-1] ENST00000446440.6 [Q96RR4-6] ENST00000392474.6 [Q96RR4-7] ENST00000392473.2 [Q96RR4-2] F5H360 F5H4I7 ENST00000347034.6 [Q96RR4-4] ENST00000544485.1 ENST00000402834.8 [Q96RR4-1] ENST00000545538.5 ENST00000337174.7 [Q96RR4-3] |