CALCB | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of CALCB at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
pancreas	100%	62.00	328 / 328	4%	0.08	7 / 178
thymus	64%	85.46	419 / 653	27%	2.75	163 / 605
intestine	83%	44.90	802 / 966	6%	3.95	29 / 527
brain	78%	59.45	2065 / 2642	3%	0.15	23 / 705
kidney	65%	18.36	58 / 89	2%	0.05	17 / 901
liver	60%	19.00	136 / 226	2%	0.23	10 / 406
spleen	60%	10.02	144 / 241	0%	0	0 / 0
lung	50%	5.17	287 / 578	10%	0.72	112 / 1155
prostate	55%	7.23	134 / 245	1%	0.01	4 / 502
stomach	46%	6.39	165 / 359	3%	0.24	9 / 286
uterus	26%	5.16	44 / 170	12%	2.85	57 / 459
peripheral blood	35%	4.44	321 / 929	0%	0	0 / 0
adipose	34%	15.29	413 / 1204	0%	0	0 / 0
heart	34%	8.63	295 / 861	0%	0	0 / 0
bladder	29%	2.90	6 / 21	5%	0.66	27 / 504
blood vessel	29%	3.02	383 / 1335	0%	0	0 / 0
ovary	27%	5.82	49 / 180	1%	0.05	6 / 430
adrenal gland	7%	1.17	19 / 258	21%	6.00	48 / 230
skin	24%	3.76	436 / 1809	1%	0.05	7 / 472
breast	21%	2.02	96 / 459	4%	0.09	41 / 1118
muscle	14%	22.66	110 / 803	0%	0	0 / 0
esophagus	10%	1.03	142 / 1445	3%	0.10	5 / 183
eye	0%	0	0 / 0	1%	0.03	1 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0007165	Biological process	signal transduction
GO_0051480	Biological process	regulation of cytosolic calcium ion concentration
GO_0007189	Biological process	adenylate cyclase-activating G protein-coupled receptor signaling pathway
GO_0006874	Biological process	intracellular calcium ion homeostasis
GO_0005615	Cellular component	extracellular space
GO_0005576	Cellular component	extracellular region
GO_0031716	Molecular function	calcitonin receptor binding
GO_0005515	Molecular function	protein binding
GO_0005184	Molecular function	neuropeptide hormone activity

Gene name	CALCB
Protein name	Calcitonin gene-related peptide 2 (Beta-type CGRP) (Beta-CGRP) (Calcitonin gene-related peptide II) (CGRP-II) Calcitonin related polypeptide beta
Synonyms	CALC2
Description	FUNCTION: CGRP induces vasodilation. It dilates a variety of vessels including the coronary, cerebral and systemic vasculature. Its abundance in the CNS also points toward a neurotransmitter or neuromodulator role.
Accessions	ENST00000324229.11 ENST00000523376.5 P10092 E7ESF5 ENST00000533448.1

CALCB report