CACNB1 | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of CACNB1 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	98%	4109.08	2580 / 2642	99%	13.76	700 / 705
thymus	99%	1385.48	647 / 653	94%	8.83	570 / 605
ovary	97%	1027.07	175 / 180	83%	4.49	359 / 430
lung	99%	1742.69	572 / 578	80%	5.68	927 / 1155
uterus	98%	1114.73	166 / 170	80%	6.08	365 / 459
bladder	95%	871.29	20 / 21	80%	4.50	404 / 504
skin	99%	1628.28	1782 / 1809	65%	2.25	306 / 472
intestine	91%	854.81	875 / 966	63%	2.72	333 / 527
breast	80%	953.39	365 / 459	70%	3.41	785 / 1118
prostate	98%	1275.80	240 / 245	50%	1.80	249 / 502
esophagus	62%	502.03	898 / 1445	80%	3.93	146 / 183
adrenal gland	60%	464.16	156 / 258	77%	9.68	178 / 230
muscle	100%	15069.05	803 / 803	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	2.28	1 / 1
blood vessel	99%	2084.06	1326 / 1335	0%	0	0 / 0
stomach	35%	269.18	125 / 359	64%	2.36	182 / 286
pancreas	7%	50.49	24 / 328	89%	6.17	159 / 178
spleen	92%	780.08	221 / 241	0%	0	0 / 0
kidney	45%	334.92	40 / 89	35%	1.37	319 / 901
adipose	74%	693.35	892 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	66%	2.30	19 / 29
tonsil	0%	0	0 / 0	58%	2.32	26 / 45
peripheral blood	40%	325.05	369 / 929	0%	0	0 / 0
heart	37%	275.25	319 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	16%	0.49	13 / 80
liver	0%	2.12	1 / 226	9%	0.37	37 / 406
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_1901385	Biological process	regulation of voltage-gated calcium channel activity
GO_1902514	Biological process	regulation of calcium ion transmembrane transport via high voltage-gated calcium channel
GO_0007268	Biological process	chemical synaptic transmission
GO_1904646	Biological process	cellular response to amyloid-beta
GO_0007528	Biological process	neuromuscular junction development
GO_0045933	Biological process	positive regulation of muscle contraction
GO_0070588	Biological process	calcium ion transmembrane transport
GO_0005891	Cellular component	voltage-gated calcium channel complex
GO_0030315	Cellular component	T-tubule
GO_0045202	Cellular component	synapse
GO_0005886	Cellular component	plasma membrane
GO_1990454	Cellular component	L-type voltage-gated calcium channel complex
GO_0008331	Molecular function	high voltage-gated calcium channel activity
GO_0005245	Molecular function	voltage-gated calcium channel activity
GO_0005515	Molecular function	protein binding

Gene name	CACNB1
Protein name	Voltage-dependent L-type calcium channel subunit beta-1 (CAB1) (Calcium channel voltage-dependent subunit beta 1) Voltage-gated calcium channel beta 1 subunit splice variant CavB1d
Synonyms	CACNLB1
Description	FUNCTION: Regulatory subunit of L-type calcium channels . Regulates the activity of L-type calcium channels that contain CACNA1A as pore-forming subunit (By similarity). Regulates the activity of L-type calcium channels that contain CACNA1C as pore-forming subunit and increases the presence of the channel complex at the cell membrane . Required for functional expression L-type calcium channels that contain CACNA1D as pore-forming subunit . Regulates the activity of L-type calcium channels that contain CACNA1B as pore-forming subunit . .
Accessions	ENST00000394310.7 [Q02641-3] Q02641 Q6TME4 ENST00000394303.8 [Q02641-1] ENST00000344140.6 [Q02641-2]

CACNB1 report