CABCOCO1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	16 studies	47% ± 13%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	98%	205.77	240 / 245	96%	12.47	482 / 502
brain	82%	237.45	2167 / 2642	85%	8.81	596 / 705
kidney	83%	70.44	74 / 89	49%	4.35	445 / 901
lung	92%	205.81	531 / 578	29%	2.30	333 / 1155
uterus	85%	105.51	144 / 170	18%	1.73	82 / 459
breast	69%	55.40	319 / 459	29%	2.18	322 / 1118
thymus	61%	45.04	398 / 653	19%	1.33	114 / 605
adrenal gland	21%	9.47	54 / 258	56%	5.05	128 / 230
intestine	62%	58.32	599 / 966	5%	0.22	25 / 527
blood vessel	63%	52.47	841 / 1335	0%	0	0 / 0
adipose	62%	48.30	747 / 1204	0%	0	0 / 0
esophagus	57%	62.97	826 / 1445	3%	0.10	5 / 183
bladder	38%	19.76	8 / 21	5%	0.21	25 / 504
ovary	14%	6.88	25 / 180	29%	2.37	123 / 430
spleen	39%	21.86	94 / 241	0%	0	0 / 0
pancreas	8%	4.05	26 / 328	24%	1.03	43 / 178
stomach	26%	15.76	95 / 359	5%	0.26	15 / 286
skin	22%	11.30	404 / 1809	5%	0.25	25 / 472
eye	0%	0	0 / 0	8%	0.48	6 / 80
heart	4%	1.61	34 / 861	0%	0	0 / 0
liver	2%	0.52	4 / 226	1%	0.03	4 / 406
muscle	1%	0.42	6 / 803	0%	0	0 / 0
peripheral blood	0%	0.70	2 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1