Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 8 studies | 31% ± 16% | |
glutamatergic neuron | 8 studies | 45% ± 16% | |
oligodendrocyte | 8 studies | 31% ± 11% | |
GABAergic neuron | 7 studies | 45% ± 16% | |
oligodendrocyte precursor cell | 6 studies | 28% ± 11% | |
interneuron | 4 studies | 63% ± 22% | |
endothelial cell | 3 studies | 18% ± 0% | |
ON-bipolar cell | 3 studies | 41% ± 14% | |
amacrine cell | 3 studies | 37% ± 14% | |
retina horizontal cell | 3 studies | 27% ± 6% | |
retinal ganglion cell | 3 studies | 24% ± 4% | |
retinal rod cell | 3 studies | 26% ± 10% | |
rod bipolar cell | 3 studies | 47% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 95% | 31.08 | 2500 / 2642 | 98% | 8.63 | 693 / 705 |
thymus | 99% | 39.00 | 646 / 653 | 94% | 4.06 | 566 / 605 |
ovary | 98% | 50.59 | 176 / 180 | 94% | 2.69 | 403 / 430 |
breast | 98% | 37.04 | 449 / 459 | 92% | 3.46 | 1033 / 1118 |
prostate | 93% | 24.11 | 228 / 245 | 96% | 3.11 | 481 / 502 |
adrenal gland | 94% | 36.74 | 242 / 258 | 92% | 8.03 | 211 / 230 |
bladder | 95% | 32.90 | 20 / 21 | 88% | 2.57 | 443 / 504 |
pancreas | 88% | 16.91 | 290 / 328 | 93% | 2.62 | 166 / 178 |
intestine | 95% | 25.21 | 916 / 966 | 85% | 2.17 | 450 / 527 |
lung | 90% | 21.38 | 518 / 578 | 90% | 2.45 | 1035 / 1155 |
esophagus | 91% | 22.17 | 1309 / 1445 | 89% | 2.66 | 162 / 183 |
uterus | 99% | 38.93 | 169 / 170 | 75% | 1.90 | 342 / 459 |
kidney | 79% | 14.21 | 70 / 89 | 91% | 2.99 | 816 / 901 |
stomach | 80% | 15.61 | 287 / 359 | 85% | 2.33 | 243 / 286 |
skin | 90% | 27.81 | 1632 / 1809 | 39% | 0.73 | 182 / 472 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.05 | 1 / 1 |
blood vessel | 98% | 34.06 | 1302 / 1335 | 0% | 0 | 0 / 0 |
adipose | 97% | 39.41 | 1171 / 1204 | 0% | 0 | 0 / 0 |
liver | 46% | 4.90 | 105 / 226 | 40% | 0.85 | 164 / 406 |
heart | 79% | 17.89 | 677 / 861 | 0% | 0 | 0 / 0 |
muscle | 74% | 12.33 | 595 / 803 | 0% | 0 | 0 / 0 |
spleen | 67% | 9.37 | 162 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 42% | 0.92 | 19 / 45 |
peripheral blood | 31% | 3.31 | 288 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 29% | 0.55 | 23 / 80 |
lymph node | 0% | 0 | 0 / 0 | 28% | 0.38 | 8 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0030424 | Cellular component | axon |
GO_0005654 | Cellular component | nucleoplasm |
GO_0008021 | Cellular component | synaptic vesicle |
GO_0044306 | Cellular component | neuron projection terminus |
GO_0030122 | Cellular component | AP-2 adaptor complex |
GO_0005634 | Cellular component | nucleus |
Gene name | BTBD8 |
Protein name | BTB domain containing 8 (cDNA FLJ60117, highly similar to BTB/POZ domain-containing protein 8) BTB domain containing 8 BTB (POZ) domain containing 8, isoform CRA_a (BTB domain containing 8) BTB/POZ domain-containing protein 8 (AP2-interacting clathrin-endocytosis) (APache) |
Synonyms | KIAA1107 hCG_1657581 |
Description | FUNCTION: Involved in clathrin-mediated endocytosis at the synapse. Plays a role in neuronal development and in synaptic vesicle recycling in mature neurons, a process required for normal synaptic transmission. . |
Accessions | A0A8V8N7F1 B4DKD6 ENST00000635934.1 ENST00000342818.4 A0A8V8SD95 ENST00000636805.2 [Q5XKL5-3] E9PEZ5 A0A6I8PIJ9 Q5XKL5 ENST00000637221.2 ENST00000674371.1 ENST00000370378.5 |