Insufficient scRNA-seq data for expression of BTBD18 at single-cell level.
Insufficient scRNA-seq data for expression of BTBD18 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 80% | 6.92 | 1152 / 1445 | 33% | 0.55 | 61 / 183 |
ovary | 92% | 12.71 | 165 / 180 | 7% | 0.12 | 31 / 430 |
spleen | 94% | 12.51 | 226 / 241 | 0% | 0 | 0 / 0 |
brain | 90% | 17.90 | 2385 / 2642 | 0% | 0.02 | 3 / 705 |
uterus | 89% | 9.51 | 152 / 170 | 0% | 0.02 | 1 / 459 |
intestine | 84% | 8.85 | 814 / 966 | 3% | 0.14 | 17 / 527 |
breast | 86% | 9.80 | 394 / 459 | 1% | 0.09 | 16 / 1118 |
thymus | 87% | 9.81 | 567 / 653 | 0% | 0 | 0 / 605 |
skin | 86% | 11.53 | 1549 / 1809 | 0% | 0 | 0 / 472 |
lung | 81% | 7.63 | 469 / 578 | 4% | 0.12 | 41 / 1155 |
adipose | 84% | 8.49 | 1007 / 1204 | 0% | 0 | 0 / 0 |
prostate | 82% | 7.98 | 201 / 245 | 1% | 0.03 | 4 / 502 |
adrenal gland | 82% | 7.38 | 211 / 258 | 0% | 0 | 0 / 230 |
muscle | 80% | 7.43 | 646 / 803 | 0% | 0 | 0 / 0 |
stomach | 74% | 6.17 | 267 / 359 | 6% | 0.14 | 17 / 286 |
kidney | 74% | 6.00 | 66 / 89 | 0% | 0.05 | 4 / 901 |
bladder | 71% | 6.38 | 15 / 21 | 2% | 0.09 | 9 / 504 |
blood vessel | 71% | 6.03 | 950 / 1335 | 0% | 0 | 0 / 0 |
heart | 68% | 4.90 | 587 / 861 | 0% | 0 | 0 / 0 |
pancreas | 59% | 4.26 | 194 / 328 | 1% | 0.04 | 1 / 178 |
peripheral blood | 57% | 5.36 | 534 / 929 | 0% | 0 | 0 / 0 |
liver | 48% | 2.65 | 109 / 226 | 0% | 0 | 0 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0010526 | Biological process | retrotransposon silencing |
GO_0007283 | Biological process | spermatogenesis |
GO_0030154 | Biological process | cell differentiation |
GO_0140541 | Biological process | piRNA transcription |
GO_0032968 | Biological process | positive regulation of transcription elongation by RNA polymerase II |
GO_0007141 | Biological process | male meiosis I |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | BTBD18 |
Protein name | BTB/POZ domain-containing protein 18 |
Synonyms | |
Description | FUNCTION: Specifically required during spermatogenesis to promote expression of piRNA precursors. The piRNA metabolic process mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and governs the methylation and subsequent repression of transposons, which is essential for the germline integrity. Acts by facilitating transcription elongation at piRNA loci during pachytene. . |
Accessions | ENST00000436147.3 B2RXH4 E9PRF5 ENST00000527995 ENST00000422652.6 ENST00000527995.2 |