Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| plasma cell | 4 studies | 23% ± 7% | |
| neuron | 4 studies | 19% ± 1% | |
| ciliated cell | 4 studies | 35% ± 10% | |
| oligodendrocyte precursor cell | 3 studies | 29% ± 8% | |
| GABAergic neuron | 3 studies | 22% ± 2% | |
| interneuron | 3 studies | 40% ± 20% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 4 studies | 19% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| ovary | 99% | 3468.27 | 178 / 180 | 94% | 3.65 | 404 / 430 |
| skin | 97% | 2847.29 | 1756 / 1809 | 80% | 1.85 | 378 / 472 |
| breast | 96% | 3084.31 | 441 / 459 | 78% | 1.61 | 876 / 1118 |
| kidney | 99% | 4214.16 | 88 / 89 | 75% | 1.52 | 678 / 901 |
| thymus | 99% | 4237.14 | 644 / 653 | 74% | 1.53 | 446 / 605 |
| brain | 99% | 16010.95 | 2622 / 2642 | 72% | 1.15 | 507 / 705 |
| pancreas | 93% | 2604.00 | 306 / 328 | 77% | 1.34 | 137 / 178 |
| prostate | 98% | 3864.50 | 240 / 245 | 72% | 1.14 | 360 / 502 |
| adrenal gland | 100% | 5507.97 | 257 / 258 | 69% | 5.39 | 159 / 230 |
| lung | 94% | 3290.47 | 546 / 578 | 74% | 1.36 | 852 / 1155 |
| stomach | 99% | 2882.45 | 355 / 359 | 65% | 1.22 | 187 / 286 |
| uterus | 100% | 3705.78 | 170 / 170 | 61% | 1.12 | 280 / 459 |
| esophagus | 91% | 2450.99 | 1320 / 1445 | 67% | 1.15 | 123 / 183 |
| intestine | 96% | 2999.61 | 931 / 966 | 61% | 1.08 | 320 / 527 |
| bladder | 86% | 2326.10 | 18 / 21 | 60% | 1.05 | 302 / 504 |
| liver | 76% | 1751.80 | 171 / 226 | 21% | 0.33 | 84 / 406 |
| adipose | 93% | 2676.81 | 1120 / 1204 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 90% | 2.48 | 72 / 80 |
| spleen | 88% | 2156.38 | 212 / 241 | 0% | 0 | 0 / 0 |
| blood vessel | 83% | 2065.06 | 1104 / 1335 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 58% | 0.99 | 26 / 45 |
| muscle | 57% | 1573.36 | 454 / 803 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 48% | 0.73 | 14 / 29 |
| peripheral blood | 46% | 1011.26 | 423 / 929 | 0% | 0 | 0 / 0 |
| heart | 42% | 845.35 | 358 / 861 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0140042 | Biological process | lipid droplet formation |
| GO_0019915 | Biological process | lipid storage |
| GO_0120162 | Biological process | positive regulation of cold-induced thermogenesis |
| GO_0034389 | Biological process | lipid droplet organization |
| GO_0045444 | Biological process | fat cell differentiation |
| GO_0016042 | Biological process | lipid catabolic process |
| GO_0050995 | Biological process | negative regulation of lipid catabolic process |
| GO_0005789 | Cellular component | endoplasmic reticulum membrane |
| GO_0005811 | Cellular component | lipid droplet |
| GO_0005515 | Molecular function | protein binding |
| GO_0005543 | Molecular function | phospholipid binding |
| Gene name | BSCL2 |
| Protein name | Seipin BSCL2 lipid droplet biogenesis associated, seipin Truncated seipin Seipin (Bernardinelli-Seip congenital lipodystrophy type 2 protein) |
| Synonyms | hCG_2020143 |
| Description | FUNCTION: Plays a crucial role in the formation of lipid droplets (LDs) which are storage organelles at the center of lipid and energy homeostasis . In association with LDAF1, defines the sites of LD formation in the ER . Also required for growth and maturation of small nascent LDs into larger mature LDs . Mediates the formation and/or stabilization of endoplasmic reticulum-lipid droplets (ER-LD) contacts, facilitating protein and lipid delivery from the ER into growing LDs . Regulates the maturation of ZFYVE1-positive nascent LDs and the function of the RAB18-ZFYVE1 complex in mediating the formation of ER-LD contacts . Binds anionic phospholipids including phosphatidic acid . Plays an important role in the differentiation and development of adipocytes (By similarity). . |
| Accessions | ENST00000464544.1 A0A804HK83 ENST00000524862 ENST00000684475.1 A0A804HK11 ENST00000531524.5 ENST00000679883.1 [Q96G97-4] ENST00000684067.1 E9PJS9 A0A804HHX0 E9PRU2 F8WER0 B1PWS6 ENST00000532818.5 E9PJK0 ENST00000682262.1 E9PSB5 ENST00000421906.5 [Q96G97-2] ENST00000413908.1 ENST00000524862.6 [Q96G97-4] ENST00000301781.10 Q96G97 ENST00000407022.7 [Q96G97-2] ENST00000683025.1 ENST00000684285.1 ENST00000403550.5 [Q96G97-2] ENST00000682223.1 ENST00000405837.5 F8W7Q8 J3KQ12 H7BYY0 ENST00000403098.6 A0A024R549 ENST00000360796.10 [Q96G97-4] ENST00000683296.1 ENST00000448568.6 ENST00000533982.1 ENST00000278893.11 [Q96G97-3] A0A804HJB1 ENST00000528874.1 A0A804HJW1 A0A804HIJ7 H7C2D5 ENST00000449636.6 E9PR78 E9PPN5 H7BXM1 ENST00000530009.1 ENST00000682555.1 A0A804HIE2 A0A0S2Z544 A0A804HKZ9 E9PIU3 |
