Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 9 studies | 28% ± 12% | |
endothelial cell | 9 studies | 29% ± 15% | |
oligodendrocyte precursor cell | 8 studies | 34% ± 13% | |
macrophage | 7 studies | 29% ± 10% | |
microglial cell | 7 studies | 29% ± 8% | |
interneuron | 6 studies | 35% ± 21% | |
GABAergic neuron | 6 studies | 38% ± 17% | |
oligodendrocyte | 6 studies | 25% ± 9% | |
epithelial cell | 5 studies | 29% ± 14% | |
fibroblast | 5 studies | 24% ± 13% | |
glutamatergic neuron | 4 studies | 51% ± 17% | |
dendritic cell | 4 studies | 16% ± 1% | |
monocyte | 4 studies | 21% ± 4% | |
endothelial cell of lymphatic vessel | 4 studies | 22% ± 6% | |
classical monocyte | 3 studies | 16% ± 1% | |
neuron | 3 studies | 29% ± 8% | |
Mueller cell | 3 studies | 20% ± 7% | |
retina horizontal cell | 3 studies | 23% ± 8% | |
smooth muscle cell | 3 studies | 18% ± 2% | |
mast cell | 3 studies | 19% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1781.72 | 1445 / 1445 | 99% | 10.72 | 181 / 183 |
lung | 100% | 2044.12 | 577 / 578 | 96% | 6.77 | 1114 / 1155 |
breast | 100% | 1969.01 | 459 / 459 | 96% | 7.52 | 1071 / 1118 |
intestine | 100% | 1881.51 | 966 / 966 | 95% | 6.85 | 501 / 527 |
uterus | 100% | 1978.84 | 170 / 170 | 94% | 6.88 | 431 / 459 |
stomach | 100% | 1343.60 | 359 / 359 | 94% | 8.17 | 268 / 286 |
pancreas | 99% | 1041.12 | 325 / 328 | 94% | 5.27 | 167 / 178 |
bladder | 100% | 1578.10 | 21 / 21 | 93% | 6.12 | 467 / 504 |
brain | 95% | 892.78 | 2512 / 2642 | 93% | 5.83 | 658 / 705 |
thymus | 100% | 2255.78 | 653 / 653 | 88% | 4.27 | 534 / 605 |
ovary | 100% | 2594.49 | 180 / 180 | 87% | 3.78 | 372 / 430 |
prostate | 100% | 1496.36 | 245 / 245 | 85% | 3.89 | 428 / 502 |
kidney | 100% | 974.18 | 89 / 89 | 84% | 4.99 | 754 / 901 |
skin | 100% | 2339.52 | 1809 / 1809 | 83% | 4.99 | 394 / 472 |
adrenal gland | 100% | 1237.97 | 258 / 258 | 73% | 3.01 | 167 / 230 |
liver | 98% | 662.85 | 222 / 226 | 56% | 2.20 | 226 / 406 |
spleen | 100% | 2070.82 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 100% | 1757.50 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1792.76 | 1332 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 2079.27 | 911 / 929 | 0% | 0 | 0 / 0 |
heart | 93% | 687.54 | 799 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 7.25 | 41 / 45 |
muscle | 87% | 476.75 | 701 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 72% | 4.37 | 21 / 29 |
eye | 0% | 0 | 0 / 0 | 43% | 1.58 | 34 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007010 | Biological process | cytoskeleton organization |
GO_0008360 | Biological process | regulation of cell shape |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
Gene name | BRWD3 |
Protein name | Bromodomain and WD repeat-containing protein 3 |
Synonyms | |
Description | FUNCTION: Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the control of cell shape. . |
Accessions | Q6RI45 ENST00000373275.5 [Q6RI45-1] |