Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 4 studies | 20% ± 5% | |
dendritic cell | 3 studies | 20% ± 3% |
Insufficient scRNA-seq data for expression of BRAT1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2688.58 | 1445 / 1445 | 100% | 40.11 | 183 / 183 |
liver | 100% | 1842.76 | 226 / 226 | 100% | 25.14 | 406 / 406 |
pancreas | 100% | 2044.49 | 328 / 328 | 100% | 30.41 | 178 / 178 |
thymus | 100% | 3930.83 | 653 / 653 | 100% | 31.87 | 604 / 605 |
uterus | 100% | 4165.71 | 170 / 170 | 100% | 36.73 | 458 / 459 |
brain | 100% | 2579.05 | 2632 / 2642 | 100% | 45.18 | 705 / 705 |
adrenal gland | 100% | 5172.27 | 258 / 258 | 100% | 39.71 | 229 / 230 |
intestine | 100% | 3034.88 | 966 / 966 | 99% | 39.20 | 524 / 527 |
prostate | 100% | 5156.61 | 245 / 245 | 99% | 45.22 | 499 / 502 |
ovary | 100% | 4117.18 | 180 / 180 | 99% | 27.30 | 427 / 430 |
stomach | 100% | 2719.81 | 359 / 359 | 99% | 37.16 | 284 / 286 |
breast | 100% | 3600.97 | 459 / 459 | 99% | 32.58 | 1109 / 1118 |
skin | 100% | 3619.38 | 1809 / 1809 | 99% | 42.79 | 468 / 472 |
kidney | 100% | 2461.52 | 89 / 89 | 99% | 24.93 | 893 / 901 |
bladder | 100% | 3305.29 | 21 / 21 | 99% | 35.38 | 497 / 504 |
lung | 100% | 2610.57 | 577 / 578 | 99% | 31.81 | 1139 / 1155 |
adipose | 100% | 3154.31 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 36.94 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 43.75 | 29 / 29 |
spleen | 100% | 4110.77 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 30.03 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 32.93 | 1 / 1 |
blood vessel | 100% | 2600.09 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 1502.64 | 794 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 1624.18 | 850 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 2338.35 | 903 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006915 | Biological process | apoptotic process |
GO_0051646 | Biological process | mitochondrion localization |
GO_0006974 | Biological process | DNA damage response |
GO_0008283 | Biological process | cell population proliferation |
GO_0001934 | Biological process | positive regulation of protein phosphorylation |
GO_0010212 | Biological process | response to ionizing radiation |
GO_0016477 | Biological process | cell migration |
GO_0006006 | Biological process | glucose metabolic process |
GO_0030307 | Biological process | positive regulation of cell growth |
GO_0005654 | Cellular component | nucleoplasm |
GO_0016020 | Cellular component | membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | BRAT1 |
Protein name | BRCA1 associated ATM activator 1 BRCA1-associated ATM activator 1 (BRCA1-associated protein required for ATM activation protein 1) |
Synonyms | BAAT1 C7orf27 |
Description | FUNCTION: Involved in DNA damage response; activates kinases ATM, SMC1A and PRKDC by modulating their phosphorylation status following ionizing radiation (IR) stress . Plays a role in regulating mitochondrial function and cell proliferation . Required for protein stability of MTOR and MTOR-related proteins, and cell cycle progress by growth factors . . |
Accessions | ENST00000421712.1 ENST00000340611.9 [Q6PJG6-1] F8WDN5 Q6PJG6 |