Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 8 studies | 44% ± 25% | |
microglial cell | 7 studies | 28% ± 9% | |
macrophage | 7 studies | 26% ± 6% | |
endothelial cell | 6 studies | 26% ± 8% | |
GABAergic neuron | 6 studies | 41% ± 21% | |
astrocyte | 6 studies | 30% ± 15% | |
classical monocyte | 5 studies | 21% ± 4% | |
interneuron | 5 studies | 38% ± 23% | |
fibroblast | 5 studies | 25% ± 6% | |
oligodendrocyte precursor cell | 5 studies | 28% ± 11% | |
epithelial cell | 4 studies | 21% ± 3% | |
dendritic cell | 4 studies | 27% ± 9% | |
monocyte | 4 studies | 25% ± 5% | |
oligodendrocyte | 4 studies | 27% ± 11% | |
non-classical monocyte | 3 studies | 20% ± 4% | |
neuron | 3 studies | 29% ± 7% | |
myeloid cell | 3 studies | 20% ± 3% | |
mesothelial cell | 3 studies | 21% ± 3% | |
hepatocyte | 3 studies | 30% ± 15% | |
plasmacytoid dendritic cell | 3 studies | 24% ± 6% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 9 studies | 35% ± 19% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1808.16 | 2639 / 2642 | 100% | 21.32 | 703 / 705 |
breast | 100% | 1525.33 | 459 / 459 | 99% | 19.85 | 1104 / 1118 |
prostate | 100% | 1207.60 | 244 / 245 | 99% | 13.54 | 496 / 502 |
lung | 100% | 1466.77 | 576 / 578 | 99% | 10.50 | 1140 / 1155 |
esophagus | 99% | 1293.05 | 1429 / 1445 | 99% | 14.69 | 182 / 183 |
thymus | 100% | 1189.85 | 651 / 653 | 96% | 10.25 | 582 / 605 |
adrenal gland | 100% | 1788.89 | 258 / 258 | 96% | 11.90 | 220 / 230 |
liver | 100% | 1193.80 | 225 / 226 | 96% | 11.12 | 389 / 406 |
stomach | 99% | 981.55 | 357 / 359 | 96% | 10.47 | 274 / 286 |
kidney | 100% | 995.57 | 89 / 89 | 95% | 13.72 | 858 / 901 |
intestine | 100% | 1253.79 | 966 / 966 | 94% | 8.21 | 496 / 527 |
uterus | 100% | 1284.42 | 170 / 170 | 93% | 8.67 | 426 / 459 |
bladder | 100% | 1539.14 | 21 / 21 | 91% | 8.12 | 461 / 504 |
ovary | 100% | 1100.78 | 180 / 180 | 87% | 5.70 | 374 / 430 |
skin | 100% | 1480.12 | 1808 / 1809 | 85% | 9.04 | 401 / 472 |
pancreas | 46% | 187.20 | 152 / 328 | 94% | 8.67 | 168 / 178 |
adipose | 100% | 1672.53 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2305.63 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 2325.83 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 998.66 | 241 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 96% | 1583.42 | 896 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 9.77 | 42 / 45 |
heart | 91% | 880.80 | 785 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 83% | 8.67 | 24 / 29 |
eye | 0% | 0 | 0 / 0 | 38% | 2.02 | 30 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0034498 | Biological process | early endosome to Golgi transport |
GO_0120009 | Biological process | intermembrane lipid transfer |
GO_0005829 | Cellular component | cytosol |
GO_0005769 | Cellular component | early endosome |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0062069 | Molecular function | GARP complex binding |
GO_0005515 | Molecular function | protein binding |
GO_0120013 | Molecular function | lipid transfer activity |
Gene name | BLTP3B |
Protein name | Bridge-like lipid transfer protein family member 3B (Syntaxin-6 Habc-interacting protein of 164 kDa) (UHRF1-binding protein 1-like) Bridge-like lipid transfer protein family member 3B |
Synonyms | KIAA0701 SHIP164 UHRF1BP1L |
Description | FUNCTION: Tube-forming lipid transport protein which mediates the transfer of lipids between membranes at organelle contact sites . Required for retrograde traffic of vesicle clusters in the early endocytic pathway to the Golgi complex . . |
Accessions | ENST00000545232.6 F8VRN3 F8W1I2 F8VW65 F8W665 F8VWX2 H0YHT7 A0A0C4DGH6 ENST00000547428.1 ENST00000279907.12 [A0JNW5-1] ENST00000548712.5 ENST00000550544.5 ENST00000356828.7 [A0JNW5-2] ENST00000551980.1 ENST00000548045.5 ENST00000551973.5 A0JNW5 |