Insufficient scRNA-seq data for expression of BARX1 at single-cell level.
Insufficient scRNA-seq data for expression of BARX1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
stomach | 100% | 9294.19 | 358 / 359 | 56% | 30.83 | 159 / 286 |
esophagus | 32% | 1610.01 | 457 / 1445 | 40% | 8.57 | 74 / 183 |
thymus | 65% | 62.01 | 426 / 653 | 5% | 1.51 | 32 / 605 |
tonsil | 0% | 0 | 0 / 0 | 62% | 15.40 | 28 / 45 |
lung | 1% | 1.10 | 3 / 578 | 55% | 31.51 | 640 / 1155 |
uterus | 15% | 11.93 | 26 / 170 | 31% | 16.34 | 144 / 459 |
intestine | 23% | 118.71 | 218 / 966 | 22% | 8.00 | 116 / 527 |
pancreas | 21% | 14.44 | 69 / 328 | 21% | 3.45 | 38 / 178 |
adipose | 40% | 460.03 | 483 / 1204 | 0% | 0 | 0 / 0 |
ovary | 7% | 4.99 | 12 / 180 | 30% | 4.69 | 127 / 430 |
breast | 23% | 23.75 | 104 / 459 | 12% | 3.08 | 131 / 1118 |
bladder | 0% | 0 | 0 / 21 | 27% | 10.62 | 137 / 504 |
liver | 10% | 5.51 | 23 / 226 | 6% | 1.07 | 24 / 406 |
blood vessel | 7% | 6.85 | 99 / 1335 | 0% | 0 | 0 / 0 |
prostate | 2% | 4.60 | 6 / 245 | 4% | 0.23 | 22 / 502 |
adrenal gland | 1% | 0.42 | 2 / 258 | 5% | 1.85 | 12 / 230 |
brain | 0% | 0.67 | 11 / 2642 | 5% | 1.61 | 34 / 705 |
kidney | 2% | 2.17 | 2 / 89 | 3% | 0.51 | 24 / 901 |
skin | 2% | 0.93 | 31 / 1809 | 3% | 0.66 | 15 / 472 |
spleen | 2% | 1.00 | 5 / 241 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 1% | 0.05 | 1 / 80 |
heart | 1% | 0.37 | 5 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0.16 | 2 / 929 | 0% | 0 | 0 / 0 |
muscle | 0% | 0.04 | 1 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0030178 | Biological process | negative regulation of Wnt signaling pathway |
GO_0055123 | Biological process | digestive system development |
GO_0016055 | Biological process | Wnt signaling pathway |
GO_0009952 | Biological process | anterior/posterior pattern specification |
GO_0045446 | Biological process | endothelial cell differentiation |
GO_0007267 | Biological process | cell-cell signaling |
GO_0048536 | Biological process | spleen development |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0000977 | Molecular function | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
Gene name | BARX1 |
Protein name | Homeobox protein BarH-like 1 |
Synonyms | |
Description | FUNCTION: Transcription factor, which is involved in craniofacial development, in odontogenesis and in stomach organogenesis. May have a role in the differentiation of molars from incisors. Plays a role in suppressing endodermal Wnt activity (By similarity). Binds to a regulatory module of the NCAM promoter. . |
Accessions | Q9HBU1 ENST00000253968.11 [Q9HBU1-1] ENST00000401724.1 [Q9HBU1-2] |