Name | Number of supported studies | Average coverage | |
---|---|---|---|
secretory cell | 6 studies | 21% ± 6% | |
goblet cell | 6 studies | 26% ± 8% | |
epithelial cell | 6 studies | 36% ± 15% | |
natural killer cell | 5 studies | 19% ± 3% | |
ciliated cell | 5 studies | 25% ± 7% | |
basal cell | 4 studies | 30% ± 8% | |
CD16-positive, CD56-dim natural killer cell, human | 3 studies | 21% ± 4% | |
fibroblast | 3 studies | 18% ± 1% | |
glutamatergic neuron | 3 studies | 23% ± 7% | |
dendritic cell | 3 studies | 22% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 3 studies | 26% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 1867.19 | 21 / 21 | 100% | 28.56 | 504 / 504 |
esophagus | 100% | 1526.49 | 1445 / 1445 | 100% | 23.17 | 183 / 183 |
intestine | 100% | 2125.17 | 966 / 966 | 100% | 19.00 | 527 / 527 |
pancreas | 100% | 1325.97 | 328 / 328 | 100% | 31.48 | 178 / 178 |
lung | 100% | 1588.21 | 577 / 578 | 100% | 24.69 | 1154 / 1155 |
stomach | 100% | 1287.50 | 359 / 359 | 100% | 16.78 | 285 / 286 |
uterus | 100% | 1695.33 | 170 / 170 | 100% | 25.54 | 457 / 459 |
prostate | 100% | 1649.48 | 245 / 245 | 99% | 12.24 | 499 / 502 |
breast | 100% | 1239.59 | 459 / 459 | 99% | 12.78 | 1109 / 1118 |
thymus | 100% | 1639.10 | 653 / 653 | 99% | 13.48 | 599 / 605 |
ovary | 100% | 2015.69 | 180 / 180 | 99% | 9.37 | 425 / 430 |
brain | 98% | 785.11 | 2602 / 2642 | 100% | 12.08 | 705 / 705 |
kidney | 100% | 1543.15 | 89 / 89 | 97% | 12.59 | 874 / 901 |
skin | 100% | 2123.31 | 1808 / 1809 | 96% | 11.60 | 455 / 472 |
adrenal gland | 100% | 1050.39 | 258 / 258 | 96% | 8.81 | 220 / 230 |
liver | 100% | 1010.04 | 226 / 226 | 93% | 8.29 | 379 / 406 |
adipose | 100% | 1535.92 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 8.17 | 29 / 29 |
spleen | 100% | 1526.34 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 37.15 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 46.50 | 1 / 1 |
blood vessel | 100% | 1745.64 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 97% | 997.72 | 834 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 92% | 1005.61 | 855 / 929 | 0% | 0 | 0 / 0 |
muscle | 91% | 455.84 | 729 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 64% | 4.03 | 51 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006643 | Biological process | membrane lipid metabolic process |
GO_0005975 | Biological process | carbohydrate metabolic process |
GO_0006486 | Biological process | protein glycosylation |
GO_0070085 | Biological process | glycosylation |
GO_0018146 | Biological process | keratan sulfate biosynthetic process |
GO_0001572 | Biological process | lactosylceramide biosynthetic process |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005576 | Cellular component | extracellular region |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0016020 | Cellular component | membrane |
GO_0008378 | Molecular function | galactosyltransferase activity |
GO_0003945 | Molecular function | N-acetyllactosamine synthase activity |
GO_0005515 | Molecular function | protein binding |
GO_0035250 | Molecular function | UDP-galactosyltransferase activity |
GO_0046872 | Molecular function | metal ion binding |
Gene name | B4GALT4 |
Protein name | Beta-1,4-galactosyltransferase 4 Beta-1,4-galactosyltransferase 4 (Beta-1,4-GalTase 4) (Beta4Gal-T4) (b4Gal-T4) (EC 2.4.1.-) (Beta-N-acetylglucosaminyl-glycolipid beta-1,4-galactosyltransferase) (Lactotriaosylceramide beta-1,4-galactosyltransferase) (EC 2.4.1.275) (N-acetyllactosamine synthase) (EC 2.4.1.90) (Nal synthase) (UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 4) (UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 4) Beta-1,4-galactosyltransferase (Beta-1,4-GalTase) (EC 2.4.1.-) |
Synonyms | hCG_22565 UNQ552/PRO1109 |
Description | FUNCTION: Galactose (Gal) transferase involved in the synthesis of terminal N-acetyllactosamine (LacNac) unit present on glycan chains of glycoproteins and glycosphingolipids . Catalyzes the transfer of Gal residue via a beta1->4 linkage from UDP-Gal to the non-reducing terminal N-acetyl glucosamine 6-O-sulfate (6-O-sulfoGlcNAc) in the linearly growing chain of both N- and O-linked keratan sulfate proteoglycans. Cooperates with B3GNT7 N-acetyl glucosamine transferase and CHST6 and CHST1 sulfotransferases to construct and elongate mono- and disulfated disaccharide units [->3Galbeta1->4(6-sulfoGlcNAcbeta)1->] and [->3(6-sulfoGalbeta)1->4(6-sulfoGlcNAcbeta)1->] within keratan sulfate polymer . Transfers Gal residue via a beta1->4 linkage to terminal 6-O-sulfoGlcNAc within the LacNac unit of core 2 O-glycans forming 6-sulfo-sialyl-Lewis X (sLex). May contribute to the generation of sLex epitope on mucin-type glycoproteins that serve as ligands for SELL/L-selectin, a major regulator of leukocyte migration . In the biosynthesis pathway of neolacto-series glycosphingolipids, transfers Gal residue via a beta1->4 linkage to terminal GlcNAc of a lactotriaosylceramide (Lc3Cer) acceptor to form a neolactotetraosylceramide . . FUNCTION: Responsible for the synthesis of complex-type N-linked oligosaccharides in many glycoproteins as well as the carbohydrate moieties of glycolipids. . FUNCTION: Responsible for the synthesis of complex-type N-linked oligosaccharides in many glycoproteins as well as the carbohydrate moieties of glycolipids. . |
Accessions | E7ETS9 ENST00000471675.1 ENST00000467604.5 B2RAZ5 ENST00000473887.5 ENST00000393765.7 ENST00000493932.5 C9J3R8 ENST00000470111.5 ENST00000483209.5 ENST00000479150.5 ENST00000491906.5 ENST00000475803.5 C9JY35 C9J5S0 ENST00000359213.7 C9JY38 O60513 ENST00000480814.5 C9JE00 C9JA31 C9J644 C9J4S5 |