B3GALNT2 | OmnibusX

Name	Number of supported studies	Average coverage
retinal cone cell	7 studies	34% ± 9%	Explore
smooth muscle cell	7 studies	23% ± 6%	Explore
astrocyte	6 studies	29% ± 13%	Explore
epithelial cell	5 studies	24% ± 8%	Explore
endothelial cell	4 studies	26% ± 9%	Explore
cardiac muscle cell	4 studies	22% ± 4%	Explore
interneuron	4 studies	36% ± 20%	Explore
GABAergic neuron	4 studies	32% ± 16%	Explore
myofibroblast cell	3 studies	18% ± 3%	Explore
glutamatergic neuron	3 studies	39% ± 14%	Explore
oligodendrocyte precursor cell	3 studies	26% ± 10%	Explore

Name	Number of supported studies	Average coverage
brain	4 studies	29% ± 9%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	541.92	459 / 459	100%	9.70	1115 / 1118
esophagus	100%	896.36	1441 / 1445	100%	11.25	183 / 183
prostate	100%	710.69	244 / 245	100%	10.56	502 / 502
pancreas	100%	1390.38	328 / 328	99%	5.45	177 / 178
intestine	100%	767.37	966 / 966	99%	6.95	524 / 527
stomach	100%	797.91	359 / 359	99%	7.20	284 / 286
uterus	100%	749.10	170 / 170	99%	8.96	455 / 459
lung	99%	463.62	572 / 578	100%	8.58	1152 / 1155
bladder	100%	884.48	21 / 21	98%	6.85	496 / 504
ovary	100%	661.46	180 / 180	97%	5.65	418 / 430
thymus	100%	570.48	650 / 653	97%	6.34	589 / 605
skin	100%	843.04	1807 / 1809	90%	5.18	423 / 472
adrenal gland	100%	601.31	258 / 258	83%	3.67	191 / 230
brain	82%	256.73	2167 / 2642	92%	3.81	651 / 705
kidney	90%	275.53	80 / 89	80%	3.04	718 / 901
liver	63%	156.62	143 / 226	84%	3.76	340 / 406
adipose	100%	567.93	1204 / 1204	0%	0	0 / 0
blood vessel	100%	1351.29	1335 / 1335	0%	0	0 / 0
muscle	100%	1359.10	803 / 803	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	7.17	45 / 45
ureter	0%	0	0 / 0	100%	7.18	1 / 1
spleen	93%	252.34	224 / 241	0%	0	0 / 0
heart	90%	456.18	771 / 861	0%	0	0 / 0
lymph node	0%	0	0 / 0	69%	2.08	20 / 29
eye	0%	0	0 / 0	45%	1.74	36 / 80
peripheral blood	23%	161.01	213 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0006493	Biological process	protein O-linked glycosylation
GO_0006486	Biological process	protein glycosylation
GO_0000139	Cellular component	Golgi membrane
GO_0005783	Cellular component	endoplasmic reticulum
GO_0005789	Cellular component	endoplasmic reticulum membrane
GO_0008376	Molecular function	acetylgalactosaminyltransferase activity
GO_0008194	Molecular function	UDP-glycosyltransferase activity
GO_0005515	Molecular function	protein binding

Gene name	B3GALNT2
Protein name	Beta-1,3-N-acetylgalactosaminyltransferase 2 UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 (Beta-1,3-GalNAc-T2) (EC 2.4.1.313) (Beta-1,3-N-acetylgalactosaminyltransferase II) Hexosyltransferase (EC 2.4.1.-)
Synonyms
Description	FUNCTION: Beta-1,3-N-acetylgalactosaminyltransferase that synthesizes a unique carbohydrate structure, GalNAc-beta-1-3GlcNAc, on N- and O-glycans. Has no galactose nor galactosaminyl transferase activity toward any acceptor substrate. Involved in alpha-dystroglycan (DAG1) glycosylation: acts coordinately with GTDC2/POMGnT2 to synthesize a GalNAc-beta3-GlcNAc-beta-terminus at the 4-position of protein O-mannose in the biosynthesis of the phosphorylated O-mannosyl trisaccharide (N-acetylgalactosamine-beta-3-N-acetylglucosamine-beta-4-(phosphate-6-)mannose), a carbohydrate structure present in alpha-dystroglycan, which is required for binding laminin G-like domain-containing extracellular proteins with high affinity. .
Accessions	ENST00000366600.8 [Q8NCR0-1] ENST00000675555.1 ENST00000676288.1 A0A6Q8PEZ9 ENST00000635244.1 [Q8NCR0-2] A0A087WY64 ENST00000313984.3 [Q8NCR0-2] A0A6Q8PGQ3 ENST00000635453.2 [Q8NCR0-1] Q8NCR0 ENST00000675193.1 ENST00000612859.4 A0A6Q8PG34 ENST00000635195.1

B3GALNT2 report