Insufficient scRNA-seq data for expression of ARVCF at single-cell level.
Insufficient scRNA-seq data for expression of ARVCF at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 2353.98 | 245 / 245 | 100% | 26.51 | 500 / 502 |
brain | 98% | 4252.03 | 2577 / 2642 | 99% | 33.79 | 699 / 705 |
thymus | 100% | 5654.87 | 653 / 653 | 96% | 31.11 | 581 / 605 |
kidney | 100% | 2258.45 | 89 / 89 | 89% | 11.07 | 800 / 901 |
uterus | 99% | 1675.05 | 169 / 170 | 89% | 15.93 | 407 / 459 |
bladder | 100% | 1112.67 | 21 / 21 | 88% | 12.66 | 443 / 504 |
pancreas | 92% | 1052.02 | 303 / 328 | 92% | 12.28 | 164 / 178 |
breast | 91% | 1719.85 | 419 / 459 | 91% | 13.58 | 1022 / 1118 |
ovary | 96% | 1328.91 | 173 / 180 | 86% | 11.06 | 370 / 430 |
intestine | 95% | 1657.26 | 914 / 966 | 87% | 9.49 | 458 / 527 |
lung | 98% | 1782.08 | 565 / 578 | 84% | 10.56 | 965 / 1155 |
stomach | 99% | 1372.33 | 356 / 359 | 78% | 8.83 | 222 / 286 |
adrenal gland | 91% | 1162.39 | 235 / 258 | 84% | 34.16 | 193 / 230 |
liver | 98% | 1550.08 | 222 / 226 | 77% | 7.95 | 311 / 406 |
esophagus | 75% | 1342.04 | 1077 / 1445 | 84% | 8.19 | 153 / 183 |
skin | 72% | 1099.74 | 1301 / 1809 | 79% | 7.78 | 371 / 472 |
spleen | 100% | 4940.64 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 15.26 | 1 / 1 |
blood vessel | 100% | 4555.64 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 95% | 1637.23 | 816 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 9.45 | 41 / 45 |
muscle | 89% | 1189.90 | 713 / 803 | 0% | 0 | 0 / 0 |
adipose | 84% | 1151.02 | 1012 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 60% | 4.42 | 48 / 80 |
peripheral blood | 7% | 57.96 | 68 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.15 | 1 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008380 | Biological process | RNA splicing |
GO_0006397 | Biological process | mRNA processing |
GO_0007155 | Biological process | cell adhesion |
GO_0098609 | Biological process | cell-cell adhesion |
GO_0005912 | Cellular component | adherens junction |
GO_0005886 | Cellular component | plasma membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0045296 | Molecular function | cadherin binding |
GO_0005515 | Molecular function | protein binding |
Gene name | ARVCF |
Protein name | ARVCF delta catenin family member ARVCF protein Splicing regulator ARVCF (Armadillo repeat protein deleted in velo-cardio-facial syndrome) Armadillo repeat gene deletes in velocardiofacial syndrome |
Synonyms | hCG_17887 |
Description | FUNCTION: Contributes to the regulation of alternative splicing of pre-mRNAs. . |
Accessions | ENST00000406259.1 C9JJX6 B9EH95 E9PDC3 ENST00000263207.8 [O00192-1] O00192 ENST00000406522.5 Q05BN6 ENST00000401994.5 [O00192-2] |