Name | Number of supported studies | Average coverage | |
---|---|---|---|
club cell | 6 studies | 40% ± 18% | |
type II pneumocyte | 6 studies | 42% ± 14% | |
ciliated cell | 5 studies | 35% ± 16% | |
brush cell | 4 studies | 31% ± 9% | |
respiratory goblet cell | 3 studies | 40% ± 16% | |
goblet cell | 3 studies | 39% ± 24% | |
kidney loop of Henle epithelial cell | 3 studies | 28% ± 7% | |
mucus secreting cell | 3 studies | 24% ± 3% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 3 studies | 20% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 94% | 421.95 | 231 / 245 | 99% | 18.77 | 499 / 502 |
pancreas | 100% | 356.77 | 328 / 328 | 72% | 3.80 | 128 / 178 |
stomach | 73% | 110.81 | 263 / 359 | 78% | 4.31 | 224 / 286 |
lung | 85% | 173.30 | 490 / 578 | 55% | 4.44 | 639 / 1155 |
thymus | 89% | 126.16 | 579 / 653 | 48% | 3.44 | 293 / 605 |
kidney | 100% | 195.44 | 89 / 89 | 37% | 2.13 | 333 / 901 |
breast | 63% | 364.47 | 290 / 459 | 70% | 7.55 | 779 / 1118 |
intestine | 48% | 83.63 | 463 / 966 | 83% | 4.73 | 440 / 527 |
esophagus | 6% | 3.42 | 84 / 1445 | 43% | 3.51 | 78 / 183 |
skin | 44% | 30.04 | 795 / 1809 | 0% | 0 | 0 / 472 |
bladder | 5% | 7.52 | 1 / 21 | 29% | 1.73 | 145 / 504 |
uterus | 6% | 6.36 | 10 / 170 | 16% | 0.98 | 73 / 459 |
liver | 7% | 2.14 | 16 / 226 | 13% | 0.75 | 51 / 406 |
ovary | 1% | 0.62 | 2 / 180 | 2% | 0.12 | 9 / 430 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.11 | 1 / 45 |
adipose | 2% | 1.20 | 21 / 1204 | 0% | 0 | 0 / 0 |
adrenal gland | 1% | 0.33 | 2 / 258 | 0% | 0 | 0 / 230 |
peripheral blood | 0% | 0.14 | 4 / 929 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 0.25 | 3 / 1335 | 0% | 0 | 0 / 0 |
heart | 0% | 0.12 | 1 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
brain | 0% | 0 | 0 / 2642 | 0% | 0 | 0 / 705 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0005737 | Cellular component | cytoplasm |
GO_0005085 | Molecular function | guanyl-nucleotide exchange factor activity |
Gene name | ARHGEF38 |
Protein name | Rho guanine nucleotide exchange factor 38 |
Synonyms | |
Description | FUNCTION: May act as a guanine-nucleotide releasing factor. . |
Accessions | Q9NXL2 ENST00000265154.6 [Q9NXL2-1] ENST00000420470.3 [Q9NXL2-2] |