ARHGEF17 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
pericyte	26 studies	30% ± 11%	Explore
smooth muscle cell	13 studies	24% ± 5%	Explore
endothelial cell	8 studies	24% ± 7%	Explore
astrocyte	6 studies	28% ± 9%	Explore
GABAergic neuron	4 studies	33% ± 12%	Explore
glutamatergic neuron	3 studies	47% ± 12%	Explore
fibroblast	3 studies	26% ± 6%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	4 studies	28% ± 12%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
ovary	100%	9121.97	180 / 180	99%	36.88	426 / 430
breast	100%	9852.44	459 / 459	98%	25.82	1098 / 1118
kidney	100%	8822.04	89 / 89	97%	40.23	877 / 901
thymus	100%	15040.59	653 / 653	96%	37.45	579 / 605
brain	93%	8208.06	2455 / 2642	99%	44.57	701 / 705
prostate	100%	10657.93	244 / 245	91%	17.16	456 / 502
lung	100%	12247.83	577 / 578	89%	17.42	1031 / 1155
uterus	99%	15784.44	169 / 170	80%	16.45	366 / 459
esophagus	86%	10494.20	1242 / 1445	87%	18.39	159 / 183
skin	81%	4074.97	1471 / 1809	91%	19.68	430 / 472
bladder	100%	10517.62	21 / 21	70%	9.85	353 / 504
stomach	90%	6636.31	322 / 359	74%	13.07	213 / 286
intestine	93%	10441.30	896 / 966	63%	8.99	333 / 527
adrenal gland	67%	2377.97	172 / 258	75%	31.15	172 / 230
pancreas	33%	979.28	109 / 328	95%	21.22	169 / 178
adipose	100%	11678.16	1204 / 1204	0%	0	0 / 0
blood vessel	100%	28196.68	1335 / 1335	0%	0	0 / 0
heart	99%	7949.05	849 / 861	0%	0	0 / 0
spleen	98%	5322.91	237 / 241	0%	0	0 / 0
eye	0%	0	0 / 0	95%	16.76	76 / 80
muscle	63%	2057.41	509 / 803	0%	0	0 / 0
tonsil	0%	0	0 / 0	62%	6.58	28 / 45
liver	8%	245.32	17 / 226	30%	4.57	120 / 406
lymph node	0%	0	0 / 0	17%	1.34	5 / 29
peripheral blood	4%	139.93	37 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1