ARHGAP39 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	9 studies	26% ± 7%	Explore
astrocyte	5 studies	29% ± 9%	Explore
oligodendrocyte precursor cell	4 studies	17% ± 1%	Explore
glutamatergic neuron	4 studies	47% ± 25%	Explore
interneuron	3 studies	29% ± 15%	Explore
neuron	3 studies	25% ± 7%	Explore
GABAergic neuron	3 studies	47% ± 18%	Explore
ependymal cell	3 studies	34% ± 13%	Explore
oligodendrocyte	3 studies	18% ± 3%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	5 studies	34% ± 16%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	99%	2279.27	2627 / 2642	99%	24.10	699 / 705
thymus	100%	1903.80	652 / 653	97%	11.25	585 / 605
prostate	99%	1024.95	243 / 245	96%	11.66	484 / 502
intestine	97%	901.63	939 / 966	95%	16.34	501 / 527
skin	89%	899.77	1619 / 1809	97%	23.07	457 / 472
pancreas	98%	660.13	321 / 328	88%	8.88	156 / 178
ovary	84%	570.18	152 / 180	100%	36.77	429 / 430
esophagus	86%	666.84	1241 / 1445	97%	16.72	178 / 183
adrenal gland	100%	843.86	258 / 258	81%	6.71	186 / 230
breast	81%	860.04	372 / 459	98%	20.83	1096 / 1118
uterus	81%	657.78	137 / 170	93%	13.59	427 / 459
bladder	76%	388.38	16 / 21	95%	12.48	479 / 504
lung	71%	598.69	408 / 578	90%	11.81	1041 / 1155
stomach	60%	299.27	215 / 359	96%	17.27	274 / 286
kidney	99%	950.15	88 / 89	44%	3.57	400 / 901
ureter	0%	0	0 / 0	100%	23.08	1 / 1
eye	0%	0	0 / 0	99%	18.68	79 / 80
tonsil	0%	0	0 / 0	87%	8.89	39 / 45
adipose	61%	295.72	731 / 1204	0%	0	0 / 0
spleen	44%	176.96	106 / 241	0%	0	0 / 0
liver	15%	61.82	33 / 226	24%	1.98	96 / 406
heart	35%	149.83	300 / 861	0%	0	0 / 0
blood vessel	22%	122.76	289 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	14%	0.80	4 / 29
muscle	2%	8.13	16 / 803	0%	0	0 / 0
peripheral blood	0%	1.66	2 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0