Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 5 studies | 20% ± 5% | |
astrocyte | 4 studies | 23% ± 2% | |
endothelial cell | 3 studies | 24% ± 3% | |
glutamatergic neuron | 3 studies | 36% ± 9% | |
goblet cell | 3 studies | 27% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 22% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 5743.44 | 1445 / 1445 | 100% | 39.00 | 183 / 183 |
pancreas | 100% | 5286.03 | 328 / 328 | 100% | 62.13 | 178 / 178 |
skin | 100% | 6225.28 | 1809 / 1809 | 100% | 88.18 | 472 / 472 |
uterus | 100% | 9003.33 | 170 / 170 | 100% | 61.00 | 459 / 459 |
thymus | 100% | 8651.34 | 653 / 653 | 100% | 41.54 | 604 / 605 |
ovary | 100% | 7767.49 | 180 / 180 | 100% | 38.22 | 429 / 430 |
brain | 100% | 6078.10 | 2633 / 2642 | 100% | 67.89 | 705 / 705 |
stomach | 100% | 5158.63 | 359 / 359 | 100% | 55.79 | 285 / 286 |
adrenal gland | 100% | 6219.45 | 258 / 258 | 100% | 45.44 | 229 / 230 |
breast | 100% | 6041.83 | 459 / 459 | 99% | 53.68 | 1112 / 1118 |
intestine | 100% | 6730.16 | 966 / 966 | 99% | 60.32 | 524 / 527 |
prostate | 100% | 10343.48 | 245 / 245 | 99% | 50.73 | 499 / 502 |
lung | 100% | 7389.57 | 577 / 578 | 100% | 46.84 | 1150 / 1155 |
liver | 100% | 4193.11 | 226 / 226 | 99% | 31.14 | 403 / 406 |
bladder | 100% | 6568.90 | 21 / 21 | 99% | 57.04 | 500 / 504 |
kidney | 100% | 6600.08 | 89 / 89 | 99% | 35.81 | 893 / 901 |
adipose | 100% | 5007.32 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 85.40 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 52.71 | 29 / 29 |
spleen | 100% | 9393.69 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 38.71 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 44.58 | 1 / 1 |
blood vessel | 100% | 5633.37 | 1333 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 3015.44 | 794 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 3717.93 | 849 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 4549.47 | 909 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0015031 | Biological process | protein transport |
GO_0016192 | Biological process | vesicle-mediated transport |
GO_0032012 | Biological process | regulation of ARF protein signal transduction |
GO_0030100 | Biological process | regulation of endocytosis |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005829 | Cellular component | cytosol |
GO_0045202 | Cellular component | synapse |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0005096 | Molecular function | GTPase activator activity |
Gene name | ARFGAP1 |
Protein name | ADP ribosylation factor GTPase activating protein 1 ADP-ribosylation factor GTPase-activating protein 1 (ARF GAP 1) (ADP-ribosylation factor 1 GTPase-activating protein) (ARF1 GAP) (ARF1-directed GTPase-activating protein) |
Synonyms | ARF1GAP |
Description | FUNCTION: GTPase-activating protein (GAP) for the ADP ribosylation factor 1 (ARF1). Involved in membrane trafficking and /or vesicle transport. Promotes hydrolysis of the ARF1-bound GTP and thus, is required for the dissociation of coat proteins from Golgi-derived membranes and vesicles, a prerequisite for vesicle's fusion with target compartment. Probably regulates ARF1-mediated transport via its interaction with the KDELR proteins and TMED2. Overexpression induces the redistribution of the entire Golgi complex to the endoplasmic reticulum, as when ARF1 is deactivated. Its activity is stimulated by phosphoinosides and inhibited by phosphatidylcholine (By similarity). . |
Accessions | ENST00000522403.6 E5RHC5 ENST00000549076.1 ENST00000370283.9 [Q8N6T3-1] E5RHH7 ENST00000353546.7 [Q8N6T3-2] ENST00000370275.8 [Q8N6T3-3] ENST00000523114.5 E5RHT6 F8VWB3 ENST00000518601.6 ENST00000547204.5 ENST00000523460.5 ENST00000519604.5 [Q8N6T3-5] E5RIU2 ENST00000519273.6 [Q8N6T3-4] E5RGL6 Q8N6T3 ENST00000520485.5 F8VWH9 ENST00000550188.1 ENST00000549047.5 H0YIQ0 F8W1U7 |