Insufficient scRNA-seq data for expression of AP5S1 at single-cell level.
Insufficient scRNA-seq data for expression of AP5S1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 612.38 | 180 / 180 | 100% | 10.91 | 430 / 430 |
skin | 100% | 794.93 | 1808 / 1809 | 100% | 12.74 | 472 / 472 |
brain | 100% | 716.44 | 2640 / 2642 | 100% | 10.30 | 705 / 705 |
breast | 100% | 660.71 | 459 / 459 | 100% | 9.40 | 1117 / 1118 |
esophagus | 100% | 628.78 | 1443 / 1445 | 100% | 8.45 | 183 / 183 |
thymus | 100% | 1127.13 | 653 / 653 | 100% | 10.50 | 604 / 605 |
prostate | 100% | 785.27 | 245 / 245 | 100% | 8.58 | 501 / 502 |
kidney | 100% | 832.71 | 89 / 89 | 100% | 8.13 | 899 / 901 |
stomach | 100% | 554.10 | 358 / 359 | 100% | 9.02 | 286 / 286 |
intestine | 100% | 625.57 | 965 / 966 | 100% | 8.65 | 526 / 527 |
liver | 100% | 750.78 | 226 / 226 | 100% | 7.18 | 404 / 406 |
uterus | 100% | 645.53 | 170 / 170 | 99% | 8.05 | 456 / 459 |
adrenal gland | 100% | 1147.75 | 258 / 258 | 99% | 8.43 | 227 / 230 |
bladder | 100% | 583.19 | 21 / 21 | 98% | 8.34 | 496 / 504 |
pancreas | 100% | 468.81 | 327 / 328 | 98% | 6.27 | 175 / 178 |
lung | 98% | 614.72 | 566 / 578 | 100% | 8.86 | 1155 / 1155 |
eye | 0% | 0 | 0 / 0 | 100% | 14.61 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 8.35 | 29 / 29 |
spleen | 100% | 887.15 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 8.13 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.56 | 1 / 1 |
adipose | 100% | 606.49 | 1202 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 794.50 | 800 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 427.82 | 1329 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 659.70 | 854 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 85% | 368.59 | 788 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0000724 | Biological process | double-strand break repair via homologous recombination |
GO_0015031 | Biological process | protein transport |
GO_0016192 | Biological process | vesicle-mediated transport |
GO_0016197 | Biological process | endosomal transport |
GO_0030119 | Cellular component | AP-type membrane coat adaptor complex |
GO_0005764 | Cellular component | lysosome |
GO_0031902 | Cellular component | late endosome membrane |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0044599 | Cellular component | AP-5 adaptor complex |
GO_0005765 | Cellular component | lysosomal membrane |
GO_0005770 | Cellular component | late endosome |
GO_0005515 | Molecular function | protein binding |
Gene name | AP5S1 |
Protein name | AP-5 complex subunit sigma-1 (Adaptor-related protein complex 5 sigma subunit) (Sigma5) Adaptor related protein complex 5 subunit sigma 1 |
Synonyms | C20orf29 |
Description | FUNCTION: As part of AP-5, a probable fifth adaptor protein complex it may be involved in endosomal transport. According to PubMed:20613862, it is required for efficient homologous recombination DNA double-strand break repair. . |
Accessions | ENST00000246041.6 ENST00000379567.6 ENST00000615891.2 A2A2L4 Q9NUS5 ENST00000455742.5 Q5JX74 ENST00000379573.6 |