Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 7 studies | 39% ± 23% | |
GABAergic neuron | 7 studies | 37% ± 19% | |
oligodendrocyte | 7 studies | 26% ± 7% | |
retinal rod cell | 6 studies | 27% ± 5% | |
interneuron | 5 studies | 35% ± 18% | |
neuron | 4 studies | 28% ± 8% | |
endothelial cell | 4 studies | 23% ± 8% | |
epithelial cell | 4 studies | 22% ± 9% | |
retina horizontal cell | 4 studies | 23% ± 4% | |
retinal cone cell | 4 studies | 37% ± 12% | |
astrocyte | 4 studies | 24% ± 4% | |
GABAergic interneuron | 3 studies | 17% ± 2% | |
microglial cell | 3 studies | 17% ± 1% | |
oligodendrocyte precursor cell | 3 studies | 23% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 712.44 | 2640 / 2642 | 99% | 7.79 | 700 / 705 |
ovary | 100% | 434.22 | 180 / 180 | 98% | 8.54 | 420 / 430 |
esophagus | 99% | 182.65 | 1426 / 1445 | 99% | 3.23 | 181 / 183 |
breast | 100% | 244.58 | 459 / 459 | 97% | 5.51 | 1089 / 1118 |
lung | 99% | 235.46 | 571 / 578 | 98% | 4.54 | 1137 / 1155 |
pancreas | 98% | 159.71 | 320 / 328 | 99% | 3.76 | 176 / 178 |
prostate | 100% | 225.26 | 244 / 245 | 96% | 3.69 | 483 / 502 |
thymus | 99% | 186.08 | 647 / 653 | 97% | 4.12 | 584 / 605 |
stomach | 100% | 220.21 | 359 / 359 | 95% | 2.68 | 273 / 286 |
adrenal gland | 98% | 278.02 | 254 / 258 | 95% | 5.56 | 219 / 230 |
bladder | 100% | 331.10 | 21 / 21 | 93% | 3.09 | 469 / 504 |
intestine | 98% | 196.45 | 943 / 966 | 95% | 2.64 | 502 / 527 |
skin | 98% | 168.63 | 1765 / 1809 | 94% | 4.57 | 444 / 472 |
kidney | 98% | 232.04 | 87 / 89 | 93% | 3.17 | 841 / 901 |
uterus | 100% | 348.53 | 170 / 170 | 90% | 3.17 | 413 / 459 |
liver | 32% | 32.58 | 73 / 226 | 71% | 1.56 | 289 / 406 |
spleen | 100% | 352.98 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.88 | 1 / 1 |
adipose | 100% | 241.67 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 381.41 | 1332 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 417.46 | 801 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 2.78 | 28 / 29 |
tonsil | 0% | 0 | 0 / 0 | 93% | 2.80 | 42 / 45 |
peripheral blood | 93% | 317.84 | 860 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 93% | 3.77 | 74 / 80 |
heart | 92% | 248.16 | 791 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0031146 | Biological process | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process |
GO_0019005 | Cellular component | SCF ubiquitin ligase complex |
GO_0031528 | Cellular component | microvillus membrane |
Gene name | AMN1 |
Protein name | Protein AMN1 homolog Antagonist of mitotic exit network 1 homolog |
Synonyms | |
Description | |
Accessions | F5GWF7 ENST00000537562.5 [Q8IY45-2] Q8IY45 ENST00000281471.11 [Q8IY45-1] ENST00000535408.5 F5H286 F5H3D1 E9PHB0 ENST00000541931.5 ENST00000537960.5 ENST00000457428.6 ENST00000536761.5 [Q8IY45-2] F5H7U5 ENST00000506446.6 F5H1R2 ENST00000542781.5 |