Name | Number of supported studies | Average coverage | |
---|---|---|---|
basal cell | 6 studies | 29% ± 10% | |
ciliated cell | 6 studies | 25% ± 11% | |
retinal ganglion cell | 6 studies | 78% ± 25% | |
keratinocyte | 4 studies | 25% ± 8% | |
squamous epithelial cell | 3 studies | 35% ± 16% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
eye | 3 studies | 16% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 19055.94 | 1440 / 1445 | 84% | 55.65 | 153 / 183 |
uterus | 99% | 13670.56 | 169 / 170 | 71% | 21.28 | 324 / 459 |
skin | 100% | 41306.36 | 1803 / 1809 | 53% | 15.55 | 250 / 472 |
bladder | 86% | 9726.90 | 18 / 21 | 43% | 11.43 | 216 / 504 |
breast | 60% | 3009.08 | 275 / 459 | 61% | 9.72 | 684 / 1118 |
intestine | 74% | 11383.00 | 718 / 966 | 40% | 8.20 | 211 / 527 |
kidney | 9% | 318.22 | 8 / 89 | 79% | 23.21 | 712 / 901 |
lung | 10% | 365.32 | 59 / 578 | 75% | 27.09 | 872 / 1155 |
tonsil | 0% | 0 | 0 / 0 | 82% | 37.00 | 37 / 45 |
stomach | 36% | 4123.08 | 130 / 359 | 45% | 9.88 | 129 / 286 |
pancreas | 0% | 0 | 0 / 328 | 81% | 28.13 | 144 / 178 |
prostate | 47% | 2707.16 | 115 / 245 | 33% | 3.04 | 167 / 502 |
ovary | 6% | 325.01 | 11 / 180 | 71% | 13.07 | 305 / 430 |
blood vessel | 70% | 3867.30 | 939 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 66% | 24.88 | 53 / 80 |
adipose | 65% | 4284.78 | 783 / 1204 | 0% | 0 | 0 / 0 |
thymus | 1% | 47.89 | 8 / 653 | 53% | 11.59 | 320 / 605 |
brain | 23% | 886.44 | 602 / 2642 | 14% | 1.62 | 101 / 705 |
adrenal gland | 1% | 109.76 | 3 / 258 | 20% | 2.90 | 47 / 230 |
liver | 6% | 224.69 | 13 / 226 | 7% | 2.02 | 28 / 406 |
heart | 2% | 68.56 | 17 / 861 | 0% | 0 | 0 / 0 |
muscle | 2% | 89.84 | 13 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0043484 | Biological process | regulation of RNA splicing |
GO_0030315 | Cellular component | T-tubule |
GO_0042383 | Cellular component | sarcolemma |
GO_0005829 | Cellular component | cytosol |
GO_0005886 | Cellular component | plasma membrane |
GO_0043034 | Cellular component | costamere |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | AHNAK2 |
Protein name | Protein AHNAK2 |
Synonyms | C14orf78 KIAA2019 |
Description | |
Accessions | ENST00000333244.6 [Q8IVF2-1] Q8IVF2 ENST00000557457.1 [Q8IVF2-2] |