Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 24 studies | 30% ± 16% | |
endothelial cell of lymphatic vessel | 15 studies | 36% ± 14% | |
capillary endothelial cell | 12 studies | 23% ± 8% | |
vein endothelial cell | 4 studies | 22% ± 8% | |
cardiac muscle cell | 4 studies | 19% ± 2% | |
endothelial cell of vascular tree | 4 studies | 25% ± 12% | |
glomerular endothelial cell | 3 studies | 27% ± 6% | |
adipocyte | 3 studies | 25% ± 2% |
Insufficient scRNA-seq data for expression of AFAP1L1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 3973.96 | 459 / 459 | 96% | 7.07 | 1073 / 1118 |
thymus | 100% | 2072.69 | 651 / 653 | 96% | 8.61 | 579 / 605 |
lung | 100% | 3500.86 | 578 / 578 | 93% | 6.45 | 1072 / 1155 |
kidney | 99% | 1193.88 | 88 / 89 | 93% | 18.21 | 836 / 901 |
skin | 90% | 1230.74 | 1632 / 1809 | 98% | 18.11 | 464 / 472 |
bladder | 100% | 1185.67 | 21 / 21 | 85% | 5.78 | 430 / 504 |
esophagus | 90% | 1078.82 | 1294 / 1445 | 93% | 7.34 | 170 / 183 |
uterus | 98% | 1865.35 | 166 / 170 | 78% | 7.02 | 358 / 459 |
adrenal gland | 80% | 706.90 | 207 / 258 | 87% | 7.18 | 199 / 230 |
prostate | 91% | 991.75 | 223 / 245 | 71% | 2.83 | 355 / 502 |
intestine | 77% | 773.91 | 746 / 966 | 69% | 3.32 | 366 / 527 |
ovary | 67% | 763.56 | 120 / 180 | 77% | 5.52 | 330 / 430 |
stomach | 47% | 399.85 | 169 / 359 | 77% | 4.14 | 219 / 286 |
liver | 23% | 152.59 | 53 / 226 | 85% | 4.63 | 346 / 406 |
adipose | 100% | 5416.63 | 1204 / 1204 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.58 | 1 / 1 |
pancreas | 5% | 28.36 | 16 / 328 | 95% | 6.81 | 169 / 178 |
brain | 9% | 57.42 | 242 / 2642 | 91% | 8.71 | 639 / 705 |
heart | 100% | 3452.02 | 858 / 861 | 0% | 0 | 0 / 0 |
muscle | 100% | 2670.47 | 800 / 803 | 0% | 0 | 0 / 0 |
spleen | 93% | 975.82 | 225 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 8.51 | 42 / 45 |
eye | 0% | 0 | 0 / 0 | 81% | 4.94 | 65 / 80 |
blood vessel | 74% | 915.75 | 984 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 41% | 1.39 | 12 / 29 |
peripheral blood | 0% | 1.12 | 2 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0042995 | Cellular component | cell projection |
GO_0001725 | Cellular component | stress fiber |
GO_0002102 | Cellular component | podosome |
GO_0005829 | Cellular component | cytosol |
GO_0070161 | Cellular component | anchoring junction |
GO_0005515 | Molecular function | protein binding |
GO_0017124 | Molecular function | SH3 domain binding |
Gene name | AFAP1L1 |
Protein name | Actin filament-associated protein 1-like 1 (AFAP1-like protein 1) |
Synonyms | |
Description | FUNCTION: May be involved in podosome and invadosome formation. . |
Accessions | ENST00000515000.1 [Q8TED9-2] Q8TED9 ENST00000296721.9 [Q8TED9-1] |