Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 6 studies | 27% ± 10% | |
epithelial cell | 5 studies | 28% ± 13% | |
GABAergic neuron | 5 studies | 25% ± 9% | |
endothelial cell | 4 studies | 18% ± 2% | |
glutamatergic neuron | 4 studies | 35% ± 12% | |
dendritic cell | 3 studies | 17% ± 1% | |
basal cell | 3 studies | 26% ± 10% | |
interneuron | 3 studies | 28% ± 12% | |
neuron | 3 studies | 21% ± 3% | |
oligodendrocyte precursor cell | 3 studies | 19% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1614.62 | 2642 / 2642 | 100% | 32.62 | 705 / 705 |
esophagus | 100% | 1134.11 | 1445 / 1445 | 100% | 17.54 | 183 / 183 |
uterus | 100% | 1148.88 | 170 / 170 | 100% | 24.49 | 458 / 459 |
lung | 100% | 882.17 | 576 / 578 | 100% | 21.22 | 1154 / 1155 |
breast | 100% | 1308.25 | 459 / 459 | 99% | 30.09 | 1111 / 1118 |
ovary | 100% | 1067.07 | 180 / 180 | 99% | 12.89 | 427 / 430 |
prostate | 100% | 1140.63 | 245 / 245 | 99% | 21.21 | 498 / 502 |
thymus | 100% | 1084.22 | 653 / 653 | 99% | 21.39 | 600 / 605 |
kidney | 100% | 1041.27 | 89 / 89 | 98% | 17.27 | 887 / 901 |
bladder | 100% | 1210.76 | 21 / 21 | 98% | 19.75 | 496 / 504 |
adrenal gland | 100% | 1035.95 | 258 / 258 | 98% | 23.72 | 226 / 230 |
stomach | 100% | 812.23 | 359 / 359 | 97% | 14.10 | 277 / 286 |
liver | 100% | 623.34 | 226 / 226 | 97% | 12.00 | 393 / 406 |
intestine | 100% | 1151.03 | 966 / 966 | 97% | 15.74 | 510 / 527 |
skin | 100% | 1055.44 | 1807 / 1809 | 95% | 17.57 | 449 / 472 |
pancreas | 94% | 380.40 | 309 / 328 | 98% | 14.68 | 175 / 178 |
blood vessel | 100% | 1244.70 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 20.95 | 29 / 29 |
spleen | 100% | 1123.85 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 19.65 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 15.81 | 1 / 1 |
adipose | 100% | 1070.57 | 1203 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 687.40 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 710.69 | 838 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 86% | 10.56 | 69 / 80 |
peripheral blood | 48% | 474.01 | 446 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006338 | Biological process | chromatin remodeling |
GO_0016479 | Biological process | negative regulation of transcription by RNA polymerase I |
GO_0045943 | Biological process | positive regulation of transcription by RNA polymerase I |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0007000 | Biological process | nucleolus organization |
GO_0000812 | Cellular component | Swr1 complex |
GO_0005730 | Cellular component | nucleolus |
GO_0005856 | Cellular component | cytoskeleton |
GO_0000786 | Cellular component | nucleosome |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0031491 | Molecular function | nucleosome binding |
GO_0005515 | Molecular function | protein binding |
Gene name | ACTR6 |
Protein name | Actin related protein 6 Actin-related protein 6 (hArp6) (hARPX) ARP6 actin-related protein 6 homolog (Yeast), isoform CRA_d (Actin related protein 6) |
Synonyms | CDA12 hCG_21802 |
Description | FUNCTION: Required for formation and/or maintenance of proper nucleolar structure and function . Plays a dual role in the regulation of ribosomal DNA (rDNA) transcription (By similarity). In the presence of high glucose, maintains active rDNA transcription through H2A.Z deposition and under glucose starvation, is required for the repression of rDNA transcription, and this function may be independent of H2A.Z (By similarity). . |
Accessions | ENST00000188312.7 [Q9GZN1-1] ENST00000551617.1 ENST00000546902.5 Q9GZN1 F8VP72 F8VSD1 G3V1Y1 ENST00000551652.5 F8W043 ENST00000547458.5 F8W0Q1 ENST00000552064.5 F8VRL1 ENST00000553038.5 ENST00000552376.5 F8W057 ENST00000548180.5 |