Name | Number of supported studies | Average coverage | |
---|---|---|---|
hepatocyte | 3 studies | 42% ± 16% |
Insufficient scRNA-seq data for expression of ABCG5 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 7517.35 | 226 / 226 | 91% | 29.49 | 371 / 406 |
adrenal gland | 97% | 20.22 | 250 / 258 | 14% | 0.45 | 32 / 230 |
intestine | 84% | 52.36 | 814 / 966 | 23% | 0.64 | 120 / 527 |
kidney | 91% | 19.44 | 81 / 89 | 14% | 0.36 | 128 / 901 |
ovary | 95% | 13.08 | 171 / 180 | 8% | 0.13 | 33 / 430 |
uterus | 95% | 24.52 | 162 / 170 | 2% | 0.02 | 7 / 459 |
brain | 97% | 22.72 | 2554 / 2642 | 0% | 0.00 | 1 / 705 |
spleen | 94% | 34.61 | 227 / 241 | 0% | 0 | 0 / 0 |
esophagus | 70% | 5.82 | 1016 / 1445 | 21% | 0.98 | 39 / 183 |
thymus | 91% | 10.42 | 596 / 653 | 0% | 0 | 0 / 605 |
prostate | 89% | 8.84 | 219 / 245 | 0% | 0.00 | 2 / 502 |
stomach | 64% | 4.46 | 228 / 359 | 26% | 0.78 | 74 / 286 |
lung | 82% | 8.28 | 474 / 578 | 6% | 0.19 | 72 / 1155 |
breast | 87% | 10.45 | 400 / 459 | 1% | 0.02 | 11 / 1118 |
adipose | 86% | 10.80 | 1033 / 1204 | 0% | 0 | 0 / 0 |
skin | 65% | 6.15 | 1170 / 1809 | 19% | 0.44 | 89 / 472 |
bladder | 67% | 4.33 | 14 / 21 | 6% | 0.13 | 31 / 504 |
blood vessel | 70% | 5.19 | 932 / 1335 | 0% | 0 | 0 / 0 |
pancreas | 59% | 3.77 | 193 / 328 | 10% | 0.37 | 18 / 178 |
heart | 62% | 4.12 | 538 / 861 | 0% | 0 | 0 / 0 |
muscle | 33% | 1.68 | 266 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 28% | 3.11 | 258 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 14% | 0.76 | 4 / 29 |
eye | 0% | 0 | 0 / 0 | 1% | 0.02 | 1 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007584 | Biological process | response to nutrient |
GO_0070328 | Biological process | triglyceride homeostasis |
GO_0030299 | Biological process | intestinal cholesterol absorption |
GO_0015918 | Biological process | sterol transport |
GO_0010212 | Biological process | response to ionizing radiation |
GO_0055085 | Biological process | transmembrane transport |
GO_0045796 | Biological process | negative regulation of intestinal cholesterol absorption |
GO_0014850 | Biological process | response to muscle activity |
GO_0038183 | Biological process | bile acid signaling pathway |
GO_0033344 | Biological process | cholesterol efflux |
GO_0009410 | Biological process | response to xenobiotic stimulus |
GO_0010949 | Biological process | negative regulation of intestinal phytosterol absorption |
GO_0042632 | Biological process | cholesterol homeostasis |
GO_0016324 | Cellular component | apical plasma membrane |
GO_0043235 | Cellular component | receptor complex |
GO_0005886 | Cellular component | plasma membrane |
GO_0043190 | Cellular component | ATP-binding cassette (ABC) transporter complex |
GO_0140359 | Molecular function | ABC-type transporter activity |
GO_0120020 | Molecular function | cholesterol transfer activity |
GO_0046872 | Molecular function | metal ion binding |
GO_0005524 | Molecular function | ATP binding |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0042626 | Molecular function | ATPase-coupled transmembrane transporter activity |
GO_0005515 | Molecular function | protein binding |
GO_0016887 | Molecular function | ATP hydrolysis activity |
Gene name | ABCG5 |
Protein name | ATP-binding cassette sub-family G member 5 (EC 7.6.2.-) (Sterolin-1) Uncharacterized protein ABCG5 |
Synonyms | |
Description | FUNCTION: ABCG5 and ABCG8 form an obligate heterodimer that mediates Mg(2+)- and ATP-dependent sterol transport across the cell membrane . Plays an essential role in the selective transport of dietary plant sterols and cholesterol in and out of the enterocytes and in the selective sterol excretion by the liver into bile . Required for normal sterol homeostasis . The heterodimer with ABCG8 has ATPase activity . . |
Accessions | Q9H222 ENST00000405322.8 [Q9H222-1] Q53T83 Q53QN9 |