Title | Total cells | ||
1 | A human breast atlas integrating single-cell proteomics and transcriptomics Dataset 1: Single-Cell RNA Sequencing of Breast Tissues: Cell Subtypes and Cancer Risk Factors cell type: F1 F2 F3 expressed genes: CA12 | ||
2 | A molecular cell atlas of the human lung from single cell RNA sequencing Dataset 2: Krasnow Lab Human Lung Cell Atlas, Smart-seq2 cell type: Alveolar Fibroblast Fibromyocyte Lipofibroblast expressed genes: CA12 | ||
3 | A molecular single-cell lung atlas of lethal COVID-19 Dataset 1: A molecular single-cell lung atlas of lethal COVID-19 cell type: Alveolar FB Intermediate pathological FB Other FB Pathological FB expressed genes: CA12 | ||
4 | A single-cell and spatially resolved atlas of human breast cancers Dataset 1: A single-cell and spatially-resolved atlas of human breast cancers cell type: CAFs MSC iCAF-like s1 CAFs MSC iCAF-like s2 CAFs myCAF like s4 CAFs myCAF like s5 CAFs Transitioning s3 expressed genes: CA12 | ||
5 | A spatially resolved atlas of the human lung characterizes a gland-associated immune niche Dataset 1: All cells and nuclei cell type: Fibro_alveolar Fibro_immune_recruiting Fibro_peribronchial Fibro_perichondrial NAF_endoneurial NAF_perineurial expressed genes: CA12 | ||
6 | A spatially resolved single cell genomic atlas of the adult human breast Dataset 1: scRNA-seq data - all cells cell type: Fibro-major Fibro-matrix Fibro-prematrix Fibro-SFRP4 expressed genes: CA12 Dataset 2: snRNA-seq data - all cells cell type: Fibroblasts expressed genes: CA12 | ||
7 | An atlas of healthy and injured cell states and niches in the human kidney Dataset 1: Integrated Single-nucleus and Single-cell RNA-seq of the Adult Human Kidney cell type: Adaptive / Maladaptive / Repairing Fibroblast Degenerative Fibroblast Degenerative Medullary Fibroblast Fibroblast Medullary Fibroblast expressed genes: CA12 | ||
8 | An integrated cell atlas of the lung in health and disease Dataset 1: An integrated cell atlas of the human lung in health and disease (core) cell type: Alveolar fibroblasts Peribronchial fibroblasts Subpleural fibroblasts expressed genes: CA12 | ||
9 | Cell Types of the Human Retina and Its Organoids at Single-Cell Resolution Dataset 2: Periphery - Cell Types of the Human Retina and Its Organoids at Single-Cell Resolution cell type: FB_01 FB_02 FB_03 expressed genes: CA12 Dataset 3: Fovea - Cell Types of the Human Retina and Its Organoids at Single-Cell Resolution cell type: FB_02 expressed genes: CA12 | ||
10 | Cell atlas of the human ocular anterior segment: Tissue-specific and shared cell types Dataset 2: Trabecular Meshwork and Corneal Scleral wedge cell type: FibroX K_Fibro Sclera_Fibro TM_Fibro Uveal_Fibro expressed genes: CA12 Dataset 3: Central Cornea cell type: K_Fibro expressed genes: CA12 Dataset 4: Ciliary Body cell type: Ciliary_Fibro expressed genes: CA12 | ||
11 | Cells of the human intestinal tract mapped across space and time Dataset 1: Total - Cells of the human intestinal tract mapped across space and time cell type: reticular cell expressed genes: CA12 | ||
12 | Construction of a human cell landscape at single-cell level Dataset 1: Construction of a human cell landscape at single-cell level cell type: Fetal fibroblast Fibroblast expressed genes: CA12 | ||
13 | Developmental cell programs are co-opted in inflammatory skin disease Dataset 1: Human healthy adult skin scRNA-seq data cell type: F1 F2 F3 expressed genes: CA12 | ||
14 | Differential cell composition and split epidermal differentiation in human palm, sole, and hip skin Dataset 1: UMAP visualization of all 12 datasets cell type: Fibroblasts I Fibroblasts II expressed genes: CA12 | ||
15 | HCA kidney seed network: University of Michigan Dataset 1: Single cell RNA-seq data from normal adult kidney tissue cell type: aFIB FIB expressed genes: CA12 | ||
16 | Integrated analysis of multimodal single-cell data (version 2) Dataset 1: Human - Lung v2 (HLCA) cell type: Alveolar fibroblasts Fibromyocytes Peribronchial fibroblasts Subpleural fibroblasts expressed genes: CA12 | ||
17 | Mapping single-cell transcriptomes in the intra-tumoral and associated territories of kidney cancer Dataset 1: Single-cell transcriptomic datasets of Renal cell carcinoma patients cell type: fibroblast expressed genes: CA12 | ||
18 | Mapping the temporal and spatial dynamics of the human endometrium in vivo and in vitro Dataset 1: Non-pregnant Uterus (Endometrium - All) cell type: Fibroblast C7 expressed genes: CA12 | ||
19 | Multimodal single cell sequencing implicates chromatin accessibility and genetic background in diabetic kidney disease progression Dataset 1: Human kidney cortex snRNA-seq data from donors with and without diabetic kidney disease cell type: FIB expressed genes: CA12 | ||
20 | SARS‐CoV‐2 receptor ACE2 and TMPRSS2 are primarily expressed in bronchial transient secretory cells Dataset 2: Airway cell type: Fibroblast expressed genes: CA12 | ||
21 | Single cell transcriptional and chromatin accessibility profiling redefine cellular heterogeneity in the adult human kidney Dataset 1: Single cell transcriptional and chromatin accessibility profiling redefine cellular heterogeneity in the adult human kidney - RNAseq cell type: FIB expressed genes: CA12 | ||
22 | Single-Cell Sequencing of Developing Human Gut Reveals Transcriptional Links to Childhood Crohn’s Disease Dataset 1: Fetal Human Gut (6-11 PCW) cell type: FOXL1+ fibroblasts FRZB+ fibroblasts WNT4+ fibroblasts expressed genes: CA12 Dataset 2: Paediatric Human Gut (4-14y) cell type: S1 fibroblasts S2 fibroblasts S4 fibroblasts expressed genes: CA12 | ||
23 | Single-cell transcriptomes from human kidneys reveal the cellular identity of renal tumors Dataset 1: mature cell type: Fibroblast expressed genes: CA12 | ||
24 | Single-cell transcriptomes of the human skin reveal age-related loss of fibroblast priming Dataset 1: Single-cell transcriptomes of the human skin reveal age-related loss of fibroblast priming cell type: Pro-inflammatory Secretory-papilliary Secretory-reticular expressed genes: CA12 | ||
25 | Single-nucleus cross-tissue molecular reference maps toward understanding disease gene function Dataset 1: Single-nucleus cross-tissue molecular reference maps to decipher disease gene function cell type: Fibroblast Fibroblast I Fibroblast II Fibroblast III expressed genes: CA12 | ||
26 | Spatially resolved multiomics of human cardiac niches Dataset 1: Combined single cell and single nuclei RNA-Seq data - Heart Global cell type: FB1 FB2 FB3 FB4_activated FB5 FB6 expressed genes: CA12 | ||
27 | Spatiotemporal immune zonation of the human kidney Dataset 1: Mature kidney dataset: full cell type: Fibroblast expressed genes: CA12 Dataset 2: Fetal kidney dataset: full cell type: Fibroblast 1 Fibroblast 2 Proliferating fibroblast expressed genes: CA12 |